Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2251 105 2e-17 seq30086 84.2 5e-11 seq210 84.2 5e-11 >seq2251 Length=6394 Score = 105 bits (116), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 206162 CTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGG 206221 |||||||| || || ||| ||||| || || || ||||| |||||| | || || | Sbjct 999 CTAAAATG---CAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTG 1055 Query 206222 AAAGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 | | ||| | | || || ||||| ||| |||||||| || || || || Sbjct 1056 AGCCTAGCGACTCTATTGAGAACGTCAAAGCGAAA-ATTCAAGACAAGGAGGGCATACCA 1114 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || ||| ||| |||||||||| ||||| ||||||||||| ||||| | ||| | || Sbjct 1115 CCAGACCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCC 1174 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||| | || || || || || || || |||||||||||||| ||| Sbjct 1175 GACTACAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGA 1225 >seq30086 Length=500 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 || |||||| || ||| | || || || ||||| || ||||| ||||| |||| Sbjct 353 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 297 Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289 ||| | | || || ||| ||||| ||||| || || || ||| |||||| Sbjct 296 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 237 Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || | | ||||||||||| |||||||||||||||||| | || ||| | || ||||| Sbjct 236 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 177 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || || ||||| ||| | || | || | ||||||| Sbjct 176 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 136 >seq210 Length=64943 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 || |||||| || ||| | || || || ||||| || ||||| ||||| |||| Sbjct 30823 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 30767 Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289 ||| | | || || ||| ||||| ||||| || || || ||| |||||| Sbjct 30766 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 30707 Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || | | ||||||||||| |||||||||||||||||| | || ||| | || ||||| Sbjct 30706 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 30647 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || || ||||| ||| | || | || | ||||||| Sbjct 30646 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 30606 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 || |||||| || ||| | || || || ||||| || ||||| ||||| |||| Sbjct 39941 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 39997 Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289 ||| | | || || ||| ||||| ||||| || || || ||| |||||| Sbjct 39998 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 40057 Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || | | ||||||||||| |||||||||||||||||| | || ||| | || ||||| Sbjct 40058 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 40117 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || || ||||| ||| | || | || | ||||||| Sbjct 40118 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 40158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181365159700811