Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 105 2e-17
seq30086 84.2 5e-11
seq210 84.2 5e-11
>seq2251
Length=6394
Score = 105 bits (116), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 206162 CTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGG 206221
|||||||| || || ||| ||||| || || || ||||| |||||| | || || |
Sbjct 999 CTAAAATG---CAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTG 1055
Query 206222 AAAGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280
| | ||| | | || || ||||| ||| |||||||| || || || ||
Sbjct 1056 AGCCTAGCGACTCTATTGAGAACGTCAAAGCGAAA-ATTCAAGACAAGGAGGGCATACCA 1114
Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340
|| ||| ||| |||||||||| ||||| ||||||||||| ||||| | ||| | ||
Sbjct 1115 CCAGACCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCC 1174
Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|| |||||| | || || || || || || || |||||||||||||| |||
Sbjct 1175 GACTACAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGA 1225
>seq30086
Length=500
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229
|| |||||| || ||| | || || || ||||| || ||||| ||||| ||||
Sbjct 353 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 297
Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289
||| | | || || ||| ||||| ||||| || || || ||| ||||||
Sbjct 296 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 237
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| | | ||||||||||| |||||||||||||||||| | || ||| | || |||||
Sbjct 236 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 177
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || || ||||| ||| | || | || | |||||||
Sbjct 176 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 136
>seq210
Length=64943
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229
|| |||||| || ||| | || || || ||||| || ||||| ||||| ||||
Sbjct 30823 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 30767
Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289
||| | | || || ||| ||||| ||||| || || || ||| ||||||
Sbjct 30766 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 30707
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| | | ||||||||||| |||||||||||||||||| | || ||| | || |||||
Sbjct 30706 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 30647
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || || ||||| ||| | || | || | |||||||
Sbjct 30646 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 30606
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229
|| |||||| || ||| | || || || ||||| || ||||| ||||| ||||
Sbjct 39941 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT--- 39997
Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289
||| | | || || ||| ||||| ||||| || || || ||| ||||||
Sbjct 39998 GACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAA 40057
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| | | ||||||||||| |||||||||||||||||| | || ||| | || |||||
Sbjct 40058 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCACCTTGTCTGACTACAAT 40117
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || || ||||| ||| | || | || | |||||||
Sbjct 40118 ATACAAAAGGAGTCGACTTTGCATTTGGTGCTTCGACTTCG 40158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181365159700811
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |