Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq210 116 4e-21 seq4589 100 3e-16 seq2251 91.5 1e-13 >seq210 Length=64943 Score = 116 bits (128), Expect = 4e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| |||| |||||||| | | ||||||| ||||||||||||||||| || || Sbjct 42392 CGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTG 42333 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || || | ||||||||| | | |||| ||||| ||||| || || || ||||| Sbjct 42332 CGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCC 42273 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || ||| || |||| | || | | ||| |||||||||| || | Sbjct 42272 TCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGG 42213 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGAC 132126 || | ||| || ||||| |||||||| | ||| || ||||| || Sbjct 42212 GTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCATCAC 42169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | ||||||||||||||||||||||||| || ||||| |||||| Sbjct 39462 ACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCC 39403 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 | ||| || || | | |||| | ||||||||| || || || ||||| || || || Sbjct 39402 AACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 39347 >seq4589 Length=3505 Score = 100 bits (110), Expect = 3e-16 Identities = 162/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 46759 TGCCATGCGTTCGCAAA-AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817 |||||||||| ||| || ||||| | ||||| | |||||||||| || ||| || Sbjct 2604 TGCCATGCGT-CGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATAAGAGGGCA 2546 Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGC-GATAGTCGAAGGCGTGtttttttCGGGCAG 46876 || || ||||| ||||||| ||||| | || | || || || || || || || Sbjct 2545 TCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATT-GAGGGTGTTTTCTTCTCCGGTTC 2487 Query 46877 TTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAA 46936 ||||| | ||||||| | || | || | ||||| || || || |||||||| Sbjct 2486 GTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAA 2427 Query 46937 CGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 |||| ||||| ||||| ||||| || ||||| |||||||||||||| Sbjct 2426 CGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCT 2379 >seq2251 Length=6394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||| | ||| | | || || |||||||||||||||||| | || ||| ||| Sbjct 1216 CAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATC 1157 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || | ||| || |||| | |||| || || || || ||||| |||||||| || || || Sbjct 1156 CTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTC 1097 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | || ||| | ||||| || || | || | || Sbjct 1096 TTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGT 1037 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| ||||| || ||||| | ||||| ||||| Sbjct 1036 TTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476431928654760