Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq210 116 4e-21
seq4589 100 3e-16
seq2251 91.5 1e-13
>seq210
Length=64943
Score = 116 bits (128), Expect = 4e-21
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| |||| |||||||| | | ||||||| ||||||||||||||||| || ||
Sbjct 42392 CGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTG 42333
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| || || | ||||||||| | | |||| ||||| ||||| || || || |||||
Sbjct 42332 CGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCC 42273
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || ||| || |||| | || | | ||| |||||||||| || |
Sbjct 42272 TCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGG 42213
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGAC 132126
|| | ||| || ||||| |||||||| | ||| || ||||| ||
Sbjct 42212 GTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCATCAC 42169
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||| | ||||||||||||||||||||||||| || ||||| ||||||
Sbjct 39462 ACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTCC 39403
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
| ||| || || | | |||| | ||||||||| || || || ||||| || || ||
Sbjct 39402 AACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 39347
>seq4589
Length=3505
Score = 100 bits (110), Expect = 3e-16
Identities = 162/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 46759 TGCCATGCGTTCGCAAA-AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817
|||||||||| ||| || ||||| | ||||| | |||||||||| || ||| ||
Sbjct 2604 TGCCATGCGT-CGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATAAGAGGGCA 2546
Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGC-GATAGTCGAAGGCGTGtttttttCGGGCAG 46876
|| || ||||| ||||||| ||||| | || | || || || || || || ||
Sbjct 2545 TCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATT-GAGGGTGTTTTCTTCTCCGGTTC 2487
Query 46877 TTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAA 46936
||||| | ||||||| | || | || | ||||| || || || ||||||||
Sbjct 2486 GTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAA 2427
Query 46937 CGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984
|||| ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct 2426 CGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCT 2379
>seq2251
Length=6394
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
|||||| | ||| | | || || |||||||||||||||||| | || ||| |||
Sbjct 1216 CAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATC 1157
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
|| | ||| || |||| | |||| || || || || ||||| |||||||| || || ||
Sbjct 1156 CTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTC 1097
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
|||||| ||| | | || | || ||| | ||||| || || | || | ||
Sbjct 1096 TTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGT 1037
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| ||||| || ||||| | ||||| |||||
Sbjct 1036 TTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476431928654760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |