Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 138 2e-26
>seq4589
Length=3505
Score = 138 bits (152), Expect = 2e-26
Identities = 290/421 (69%), Gaps = 15/421 (4%)
Strand=Plus/Minus
Query 1455897 GTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT 1455956
|| || ||||| ||| || || || ||||||||||| ||| || | || ||
Sbjct 2815 GTTCTGGCCTTCTTT-GCAGCGAGTGATGGCATCGTTAACGAAAATTTAACCTTGAATTT 2757
Query 1455957 TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGA 1456016
| || || || ||| | || ||||| |||| ||||| || | || | ||| | ||
Sbjct 2756 TTGTAACGAAGTTCAAGTTCCTGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGA 2697
Query 1456017 AAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGA 1456076
||||| || ||||||| || || || |||||||| || || ||||||||||||| ||
Sbjct 2696 GAACATTCATTCTGAAATGTATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCAGA 2637
Query 1456077 GAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTG 1456136
| || | ||| |||||| | ||| |||| | || || ||||| || ||
Sbjct 2636 GCGTGATTTTTTATTTAACGCCATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTG 2577
Query 1456137 GGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGC 1456193
||| | ||||||||| || || |||||| ||| | || ||||| | || |||
Sbjct 2576 GGCACTTAAGTGGATCGCGAATAA-GAGGGCATCG----TACGCTGAGCGTGTGGT-GGC 2523
Query 1456194 TTT-GCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCA 1456250
||| || || | ||||| | || ||||| || || ||| | || ||||||||||
Sbjct 2522 TTTCGCTGCTATTGAGGGTGTTTTCTTCTCCGGTTCGTT-TGCTTCTATTTTTTGGCTCA 2464
Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAA 1456310
||||||| || |||||||| |||||| ||| || ||||| | ||||||||||| |||
Sbjct 2463 AGAAGCGTGGTCTCATGCCTGGTCTT-ACCTTCAGTAACGAGCTGATCAGTCGCGATGAA 2405
Query 1456311 G 1456311
|
Sbjct 2404 G 2404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7174908867742742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |