Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 143 3e-29
seq10174 105 7e-18
seq210 96.9 4e-15
seq30086 89.7 5e-13
>seq2251
Length=6394
Score = 143 bits (158), Expect = 3e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| |||| ||| || || || ||||| ||||||||||||||||||||||||
Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || | || || | ||| ||||| ||||| || | || ||||| || || |
Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
||||||| || || ||||||||||| |||||| || | | |||| | || |
Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAA 1053
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
| || ||||| |||||||| || || | |||||||| ||||||||||||||
Sbjct 1052 CCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001
>seq10174
Length=1708
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| || || ||||| || ||||| ||||| ||||||||| | || |
Sbjct 1050 AGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGC 1109
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | || ||||| |||||||| | ||||||||| || || || || || ||
Sbjct 1110 CCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCC 1169
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||||||| || || || | | ||| || | ||| || || || ||
Sbjct 1170 TTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTG 1229
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| | |||||| || ||||| |||||
Sbjct 1230 ATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267
>seq210
Length=64943
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| || || || || || |||||||||||||||||||| | ||| ||
Sbjct 30381 AGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGA 30440
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || ||||| |||||||||||||| || || || ||||| ||
Sbjct 30441 CCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCC 30500
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || || | | ||| || ||||| || | |||
Sbjct 30501 TTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTA 30560
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || || || ||||||||
Sbjct 30561 ATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA- 134557
|||| ||| | || || || || ||||||||||||||||||| || || | ||| ||
Sbjct 42386 CGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGT--CCGACAGAGTGCGAC 42329
Query 134558 -GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
||| || | |||||| || ||||| || | ||| || || || || || ||||| || |
Sbjct 42328 CGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCT 42269
Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676
| || ||||| || || || || | | || || ||||| || || ||||
Sbjct 42268 TGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAA 42209
Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || || || || | |||||| ||||| ||||||||
Sbjct 42208 TCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||| | || || || ||||||||||| || ||||||||| | ||| ||
Sbjct 30837 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 30896
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || || || || |||||||||||||| ||||| ||||| ||
Sbjct 30897 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 30956
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || || | | || | || || || ||||||
Sbjct 30957 TTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTA 31016
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||| || || || || ||||||||
Sbjct 31017 ATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||| | || || || ||||||||||| || ||||||||| | ||| ||
Sbjct 39927 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 39868
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || || || || |||||||||||||| ||||| ||||| ||
Sbjct 39867 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 39808
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || || | | || | ||||| || || |||
Sbjct 39807 TTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTA 39748
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||| || || || || ||||||||
Sbjct 39747 ATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||| | || || || || |||||||| || ||||||||| | ||| ||
Sbjct 39699 AGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 39640
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || ||||| |||||||||||||| || || || ||||| ||
Sbjct 39639 CCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCC 39580
Query 134616 TTTTCTTGAATTTT 134629
|| ||||| |||||
Sbjct 39579 TTGTCTTGGATTTT 39566
>seq30086
Length=500
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||| | || || || ||||||||||| || ||||||||| | ||| ||
Sbjct 367 AGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGA 426
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || || || || |||||||||||||| ||||| ||||| ||
Sbjct 427 CCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCC 486
Query 134616 TTTTCTTGAATTTT 134629
|| |||||||| ||
Sbjct 487 TTGTCTTGAATCTT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505208300709320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |