Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 214 2e-50
seq4951 163 4e-35
>seq4589
Length=3505
Score = 214 bits (236), Expect = 2e-50
Identities = 409/602 (68%), Gaps = 3/602 (0%)
Strand=Plus/Plus
Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661
|| || || |||| || || ||||| || ||||| ||||| | ||| || | |||
Sbjct 2367 TGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCG 2426
Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721
||| || || || |||||||| ||||||||||| ||||||||||| || | ||||||
Sbjct 2427 TTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAAC 2486
Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781
|| || || ||||| | || || | || || || || || | | ||| |||| |
Sbjct 2487 GAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGAT 2546
Query 39782 G---TATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838
| | | ||| |||||||| |||||||||| || ||||| || || ||||
Sbjct 2547 GCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGC 2606
Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898
|||| || || ||||| | | ||| || | || || ||||||||||| ||
Sbjct 2607 GTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATC 2666
Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958
| ||| ||||||||| ||||| ||||| |||| |||| || | ||| ||||||||
Sbjct 2667 AGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAA 2726
Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018
| || |||| || ||| || || |||||| | | |||||||| || || ||
Sbjct 2727 CGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGATG 2786
Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078
|||||||| || ||||| || |||| |||| |||||| | | |||| | |
Sbjct 2787 CCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTG 2846
Query 40079 AATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138
| || | ||| || | | ||| || | || ||| || || ||| | |||||||| ||
Sbjct 2847 AGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAA 2906
Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAAT 40198
|| | || || || || | | ||| || ||| ||||||||||||| | | ||||||
Sbjct 2907 GCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAAT 2966
Query 40199 CT 40200
||
Sbjct 2967 CT 2968
>seq4951
Length=3275
Score = 163 bits (180), Expect = 4e-35
Identities = 318/467 (68%), Gaps = 2/467 (0%)
Strand=Plus/Plus
Query 69515 GTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATG 69574
||||||| || || ||||| |||| | | ||||| ||||||| ||| ||| || |
Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752
Query 69575 ACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAA 69634
||| | || || | ||| | ||||| || |||||||| |||||||| || | |
Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812
Query 69635 AGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCA 69694
| |||||||| | | | | || ||| || || || || | || | ||| | ||
Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872
Query 69695 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTC 69754
| ||| | ||||||||| || || || | || | | | || |||||||| || || |
Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932
Query 69755 CCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAG 69814
| || |||| || | |||||| | || |||||| ||||||||| | || |||||| |
Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992
Query 69815 ATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGC-GAATATTACTAATAGATAGA 69873
| | ||||| || || | || ||| | | ||| | | ||||| | || | |||
Sbjct 1993 ACTCCCCATTGGTGCCGGCGATG-AACGTGCCCTTACTCCGAATACAATGAACATTGAGA 2051
Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933
|| || || || || |||| ||||| || ||||| |||| | ||||| ||||| |||
Sbjct 2052 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2111
Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980
|| || || ||||| |||| | | | ||| ||||||||||| ||
Sbjct 2112 TCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
Score = 113 bits (124), Expect = 6e-20
Identities = 177/251 (71%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933
|| || || || || |||| ||||| || ||||| |||| | ||||| ||||| |||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993
|| || || ||||| |||| | | | ||| ||||||||||| || || ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053
|| || ||||| | || || || || ||| | ||||| ||| |||| | ||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 70054 GTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACAT 70112
|| ||||| || | || | || | | | ||||| ||||||| ||| ||||| |||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCG-TGAATACCTATCGAGACCCGCATAAACAT 2426
Query 70113 ATGCTGAGGTC 70123
| ||||||||
Sbjct 2427 GTACTGAGGTC 2437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686650427841240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |