Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 168 5e-37
>seq4589
Length=3505
Score = 168 bits (186), Expect = 5e-37
Identities = 402/598 (67%), Gaps = 25/598 (4%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||||||| | ||||| |||||||||||||| ||| | | || || |||||
Sbjct 2968 AGATTTGTCGTGATGCCAATACAATATCATGACATTTGGGAGTTCTATAAGAAAGCTGTC 2909
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCACATTGGATTGC 43815
|| || |||||||| | || || |||||||| | || || |||| | |||||
Sbjct 2908 GCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTTACCG-ATTGGG---- 2854
Query 43816 ATTAAAACCACAA-------GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868
|||| | ||| ||| ||| ||||| || | ||| |||| || ||||| |
Sbjct 2853 ---AAAATCTCAATGATGGTGAACGACACTTTATTTCGTATGTTCTGGCCTTCTTTGCAG 2797
Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA-GAAGTTCAATTA 43927
|||| || || || || || |||||||| | ||| | || ||||||||| |
Sbjct 2796 CGAGTGATGGCATCGTTAACGAAAATTTAACCT-TGAATTTTTGTAACGAAGTTCAAGTT 2738
Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987
|| || || || ||||||||||| | ||| | ||| | || || |||||||| ||||||
Sbjct 2737 CCTGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATG 2678
Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGA-TGGGCACGAGAAGCATCGATTGTTTAA 44046
|| ||||||||| ||||| || |||| || |||| ||| || || |||||
Sbjct 2677 TATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCA-GAGCGTGATTTTTTATTTAA 2619
Query 44047 TGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT-- 44103
|| || |||| | || |||| | | || || || ||||| ||||| |||||
Sbjct 2618 CGCCATTCAAACGCTGCCATGCG-TCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCG 2560
Query 44104 -AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162
||| | | || | | || || | || || || || | | | || || |||
Sbjct 2559 CGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTT 2500
Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222
|||| || || |||||||| | || |||||| | ||||| || ||| | ||||||||
Sbjct 2499 TCTTCTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTC 2440
Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
| || || || ||| | || ||||| ||||||||| | || ||| ||||| ||
Sbjct 2439 TTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTG 2382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397310239346455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |