Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4589 168 5e-37 >seq4589 Length=3505 Score = 168 bits (186), Expect = 5e-37 Identities = 402/598 (67%), Gaps = 25/598 (4%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||||||| | ||||| |||||||||||||| ||| | | || || ||||| Sbjct 2968 AGATTTGTCGTGATGCCAATACAATATCATGACATTTGGGAGTTCTATAAGAAAGCTGTC 2909 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCACATTGGATTGC 43815 || || |||||||| | || || |||||||| | || || |||| | ||||| Sbjct 2908 GCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTTACCG-ATTGGG---- 2854 Query 43816 ATTAAAACCACAA-------GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTG 43868 |||| | ||| ||| ||| ||||| || | ||| |||| || ||||| | Sbjct 2853 ---AAAATCTCAATGATGGTGAACGACACTTTATTTCGTATGTTCTGGCCTTCTTTGCAG 2797 Query 43869 CGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA-GAAGTTCAATTA 43927 |||| || || || || || |||||||| | ||| | || ||||||||| | Sbjct 2796 CGAGTGATGGCATCGTTAACGAAAATTTAACCT-TGAATTTTTGTAACGAAGTTCAAGTT 2738 Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 || || || || ||||||||||| | ||| | ||| | || || |||||||| |||||| Sbjct 2737 CCTGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATG 2678 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGA-TGGGCACGAGAAGCATCGATTGTTTAA 44046 || ||||||||| ||||| || |||| || |||| ||| || || ||||| Sbjct 2677 TATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCA-GAGCGTGATTTTTTATTTAA 2619 Query 44047 TGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT-- 44103 || || |||| | || |||| | | || || || ||||| ||||| ||||| Sbjct 2618 CGCCATTCAAACGCTGCCATGCG-TCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCG 2560 Query 44104 -AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTT 44162 ||| | | || | | || || | || || || || | | | || || ||| Sbjct 2559 CGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTT 2500 Query 44163 TCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGT 44222 |||| || || |||||||| | || |||||| | ||||| || ||| | |||||||| Sbjct 2499 TCTTCTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTC 2440 Query 44223 TGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | || || || ||| | || ||||| ||||||||| | || ||| ||||| || Sbjct 2439 TTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTG 2382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397310239346455