Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4951 98.7 1e-15 >seq4951 Length=3275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 171/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 111844 CCCAGCC-CACTTT--GAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 111900 |||| || |||||| ||||| | ||||||| | || || | || || || | ||| Sbjct 2193 CCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCCTCGAT 2252 Query 111901 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 111960 ||| ||||| | | || | ||||| || |||||||| | | || || ||||| Sbjct 2253 ACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTCCCAGC 2312 Query 111961 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGTCGTATGTCT 112019 || ||||| ||||||| || ||||| ||| || || ||||| | ||| |||| Sbjct 2313 GTTAAAGAGCGTTGGTGAGGCATGAATCAACC-ACTTTCCAGACATTAGATTGTACGTCT 2371 Query 112020 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACT 112079 | | | ||| ||| | |||||| ||||| || || || | ||||||||| |||||||||| Sbjct 2372 CAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATGTACT 2431 Query 112080 GTGG 112083 | || Sbjct 2432 GAGG 2435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627795773613600