Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 114 2e-20
seq4951 89.7 6e-13
>seq4589
Length=3505
Score = 114 bits (126), Expect = 2e-20
Identities = 182/256 (71%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 94717 TTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 94776
||| | ||||| ||||| | || || | ||||| ||||||||||| | ||||||
Sbjct 2623 TTTAACGCCATTCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAGTGG 2564
Query 94777 TTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGT 94836
| | | ||| | || | |||||||| | | || || || | ||||||||
Sbjct 2563 ATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGT 2504
Query 94837 ATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC 94895
| |||||||| ||||| || ||| |||||| ||||||||||||||| |||||||||||
Sbjct 2503 GTTTTCTTCTCCGGTTCGTT-TGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCC 2445
Query 94896 AGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| |||| |||||||| ||| ||| || || || || ||| || |||||
Sbjct 2444 TGGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGC 2385
Query 94956 G-GTGGAACTTTTCAA 94970
| || || |||||||
Sbjct 2384 GTGTCTAA-TTTTCAA 2370
>seq4951
Length=3275
Score = 89.7 bits (98), Expect = 6e-13
Identities = 169/244 (69%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||||||||||| ||||| || | || |||||||| || |||||| | ||| ||| |
Sbjct 2435 CCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGATGCTGCC 2376
Query 104282 TTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| | ||||| || || ||| ||||| || ||||||| |||||
Sbjct 2375 ATTGAGACGTACAATCTAATGTCTGGAAAGT-GGTTGATTCATGCCTCACCAACGCTCTT 2317
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|| ||||| || || | | || ||||| || ||||| | || | | ||||| ||
Sbjct 2316 TAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGA 2257
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTC--AAAGTG-GGC 104457
| ||| | || || || | || || | ||||||| | ||||| |||||| ||
Sbjct 2256 CAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGG 2197
Query 104458 TGGG 104461
||||
Sbjct 2196 TGGG 2193
Score = 86.0 bits (94), Expect = 7e-12
Identities = 233/348 (67%), Gaps = 9/348 (3%)
Strand=Plus/Minus
Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572
|| || ||||| | || ||||| || | || ||||| || || || ||| ||| ||
Sbjct 2008 GGCACCAATGGGGAGTCGAATGGTCTTGTACCGATGCTGCGAGTCTTCAACAGCACTGCT 1949
Query 104573 CGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629
|| |||||| | |||| |||| ||| || | |||| ||||| |||||||||
Sbjct 1948 CGTTATGTAGACCAAGGTGGGAACAAACGACCTGGCGCCTTCGCTGTCTACCTTGAGCCA 1889
Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689
||||| | ||| | || | || | || ||||| ||| || | ||||||
Sbjct 1888 TGGCATCCAGATGTACTGCAATTTGTGGAATTGCGGAAGAACACTGGCGCTGAGGAGATT 1829
Query 104690 CGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748
|| ||| | ||||| ||| ||| || ||||| || ||||| ||||||||||| |||||
Sbjct 1828 CG-TGCAAGAGATCTTTTCCTCGCGCTTTGGATCCCCGATCTGTTCATGAAGAGGGTTGA 1770
Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTG-TCCAGA-CAAGGCACCTGGTCTCTCCGATGCC 104806
|||| ||| | || | | | ||| | || || |||||||| | ||| |
Sbjct 1769 AACTGGTGGTTCATGGAC-CTTTATGGATCCCCATGAATGC-CCTGGTCTTGCTGATTGC 1712
Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGT 104854
||| ||||| || ||| |||||| | |||||||| |||||||
Sbjct 1711 TGGGGGGAGGATTTCGAACAACTTTACTCGAAGTACGAATCAGAAGGT 1664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583041413740840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |