Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 129 6e-25
seq4589 122 1e-22
>seq4951
Length=3275
Score = 129 bits (142), Expect = 6e-25
Identities = 295/439 (67%), Gaps = 4/439 (1%)
Strand=Plus/Minus
Query 19244 CAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAG 19303
|||||||| ||||| || | || | |||||||||||||| ||||||||||| |||||
Sbjct 2158 CAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGACAGTATTGAGGGCATATACGAC 2099
Query 19304 ACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTC- 19362
|||||||| |||| || | |||||||| | | || || ||||| | || || ||
Sbjct 2098 ACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGGTGGGATCGGTCT-CAATGTTCA 2040
Query 19363 GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG-ACGGTATCG 19421
||| ||| | || || ||| || || || || | || || | ||| | |
Sbjct 2039 TTGTATTCGGAGTAAGGGCACGTTCATCGCCGGCACCAATGG-GGAGTCGAATGGTCTTG 1981
Query 19422 TCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAAC 19481
| || ||||| || |||||||||| ||| || | || || |||| || || |||||
Sbjct 1980 TACCGATGCTGCGAGTCTTCAACAGCACTGCTCGTTATGTAGACCAAGGTGGGAACAAAC 1921
Query 19482 GCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCG 19541
| ||| | ||||| ||||||| ||||||||||| | || || || | || | |
Sbjct 1920 GACCTGGCGCCTTCGCTGTCTACCTTGAGCCATGGCATCCAGATGTACTGCAATTTGTGG 1861
Query 19542 AACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGT 19601
|| |||| |||| || | |||||||| || | || || ||| || | |
Sbjct 1860 AATTGCGGAAGAACACTGGCGCTGAGGAGATTCGTGCAAGAGATCTTTTCCTCGCGCTTT 1801
Query 19602 GGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCC 19661
|||| || || || |||||| ||| |||||| | | | |||| | | ||| |
Sbjct 1800 GGATCCCCGATCTGTTCATGAAGAGGGTTGAAACTGGTGGTTCATGGACCTTTATGGATC 1741
Query 19662 CGCACGAATGCCCTGGCCT 19680
| || ||||||||||| ||
Sbjct 1740 CCCATGAATGCCCTGGTCT 1722
Score = 125 bits (138), Expect = 8e-24
Identities = 180/254 (71%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713
||||| || || | | |||||||| | || |||| |||||||| ||||| ||||||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTA 79773
||||| ||| |||||||| | ||||| |||||||| |||||||||| || |||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 79774 CCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTAC 79833
|| ||||| ||||| || || | || || | || ||||| ||| |||| ||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 79834 GTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGG 79893
||||| || | | ||| |||||||| || || | || ||| ||||| || | |
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 79894 TACTGGGGCGTCTC 79907
||||| || ||||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 95.1 bits (104), Expect = 1e-14
Identities = 176/258 (68%), Gaps = 8/258 (3%)
Strand=Plus/Minus
Query 19097 GAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCG 19156
|||| ||||||||| | || ||||| ||| || | || || || ||||| ||| |
Sbjct 2441 GAGAGACCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTG--- 2385
Query 19157 CGAGTCCGC----GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCC 19212
|| | || ||||| ||| | || ||| |||| || | || || | ||
Sbjct 2384 -GATGCTGCCATTGAGACGTACAATCTAATGTCTGGAAAGTGGTTGATTCATGCCTCACC 2326
Query 19213 GACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTAT 19272
|| || || ||||| || ||| || | |||||||| ||||| || | || | ||
Sbjct 2325 AACGCTCTTTAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGAT 2266
Query 19273 GAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAA 19332
|||||||||||| || |||||||| ||||| |||||||| |||| || | ||||||||
Sbjct 2265 GAAGGATGACAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAA 2206
Query 19333 GTGGTCCGGGGGTATCGG 19350
| | || || |||||
Sbjct 2205 AAGTGCGGGTGGGATCGG 2188
>seq4589
Length=3505
Score = 122 bits (134), Expect = 1e-22
Identities = 353/534 (66%), Gaps = 17/534 (3%)
Strand=Plus/Minus
Query 59595 TATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTG 59654
||||||||||| ||| ||| || ||| | || |||||| |||| | || || ||
Sbjct 2923 TATAAGAAAGCTGTCGCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTT 2864
Query 59655 AAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTC 59714
| |||||||| || |||||| | | || | || || || | || |||||||||
Sbjct 2863 ACCGATTGGGAAAATCTCAATGATGGTGAACGACACTTTATTTCGTATGTTCTGGCCTTC 2804
Query 59715 TTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTC 59774
|| || ||||||||||| || || | |||||| || | |||| |||| || || ||
Sbjct 2803 TTTGCAGCGAGTGATGGCATCGTTAACGAAAATTTAACCTTGAATTTTTGTAACGAAGTT 2744
Query 59775 CAGATTGCCGAGGCCCGGTCGTTCTACGCGTAT-CA----GTCGTTCAACGAGTCTATCC 59829
|| || | ||||| || | || || | | || || | |||| ||| || |
Sbjct 2743 CAAGTTCCTGAGGCTCGTTGTTTTTATG-GAATGCAAGTGGCCGTT----GAGAACATTC 2689
Query 59830 ACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTG 59889
| || || | ||| || || ||||||||| | |||||||| |||| |||| | |
Sbjct 2688 ATTCTGAAATGTATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCAGAGCGTGATT 2629
Query 59890 GTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATG 59948
| | || ||||| | ||| | || || || | || || || ||||| |
Sbjct 2628 TTTTATTTAACGCCATTCAAACGCTGCCATGC-GTCGCTAAGAAGGCGGATTGGGCACTT 2570
Query 59949 CAGTGGAT---GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GT 60004
||||||| || | | ||||| | || | ||| | | ||||| || ||| |
Sbjct 2569 AAGTGGATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGC-TGCTAT 2511
Query 60005 GGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCT 60064
|| || | |||||||| || ||||| | ||||||| |||||||| |||||||| ||
Sbjct 2510 TGAGGGTGTTTTCTTCTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCT 2451
Query 60065 CATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
|||||| || || | ||| ||||||||||| || || || ||||| ||
Sbjct 2450 CATGCCTGGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCA 2397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548318479253040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |