Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4951 147 2e-30 >seq4951 Length=3275 Score = 147 bits (162), Expect = 2e-30 Identities = 187/255 (73%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACAC 53232 |||| |||||||| | || ||||| ||| | | ||||| ||||| || ||| | | Sbjct 2441 GAGAGACCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGAT 2382 Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292 || || | |||||||||| | ||||| ||||| || | || ||| | ||||| Sbjct 2381 GC-TGCCATTGAGACGTACAATCTAATGTCTGGAAAGTGGTTGATTCATGCCTCACCAAC 2323 Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352 || || |||||||| ||| | | | |||||||| |||||||| |||| ||||||| Sbjct 2322 GCTCTTTAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAA 2263 Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412 ||||||| ||||| ||||| ||||| |||||||| ||||||||| |||||||| | Sbjct 2262 GGATGACAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAG 2203 Query 53413 GTCGGGTGGTATCGG 53427 ||||||| ||||| Sbjct 2202 TGCGGGTGGGATCGG 2188 Score = 116 bits (128), Expect = 4e-21 Identities = 205/295 (69%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 ||||| ||| | | | |||||||| |||||||| |||| |||||||||||||| Sbjct 2176 GCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGACAGT 2117 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || ||||| ||||| |||||||| ||||||||| |||||||| | ||||||| Sbjct 2116 ATTGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGGTGGG 2057 Query 53423 ATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 |||||| | || || || | | | || || ||||| ||| || || || | Sbjct 2056 ATCGGTCT-CAATGTTC-ATTGTATTCGGAGTAAGGGCACGTTCATCGCCGGCACCAATG 1999 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | | | |||| | || || ||||| || |||||||||| ||| || || || || Sbjct 1998 GGGAGTCGAATGGTCTTGTACCGATGCTGCGAGTCTTCAACAGCACTGCTCGTTATGTAG 1939 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595 |||| ||||| || || || | ||||| ||||||| ||||| ||||| Sbjct 1938 ACCAAGGTGGGAACAAACGACCTGGCGCCTTCGCTGTCTACCTTGAGCCATGGCA 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547010171541800