Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 147 2e-30
>seq4951
Length=3275
Score = 147 bits (162), Expect = 2e-30
Identities = 187/255 (73%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACAC 53232
|||| |||||||| | || ||||| ||| | | ||||| ||||| || ||| | |
Sbjct 2441 GAGAGACCTCAGTACATGTTTATGCGGGTCTCGATAGGTATTCACGGCGAAGACGTGGAT 2382
Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292
|| || | |||||||||| | ||||| ||||| || | || ||| | |||||
Sbjct 2381 GC-TGCCATTGAGACGTACAATCTAATGTCTGGAAAGTGGTTGATTCATGCCTCACCAAC 2323
Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352
|| || |||||||| ||| | | | |||||||| |||||||| |||| |||||||
Sbjct 2322 GCTCTTTAACGCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAA 2263
Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412
||||||| ||||| ||||| ||||| |||||||| ||||||||| |||||||| |
Sbjct 2262 GGATGACAGTATCGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAG 2203
Query 53413 GTCGGGTGGTATCGG 53427
||||||| |||||
Sbjct 2202 TGCGGGTGGGATCGG 2188
Score = 116 bits (128), Expect = 4e-21
Identities = 205/295 (69%), Gaps = 4/295 (1%)
Strand=Plus/Minus
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
||||| ||| | | | |||||||| |||||||| |||| ||||||||||||||
Sbjct 2176 GCTGGGACGCCTAATGCACAGATGTCTAGCTGCTTTTTGGTCACGATGAAGGATGACAGT 2117
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || ||||| ||||| |||||||| ||||||||| |||||||| | |||||||
Sbjct 2116 ATTGAGGGCATATACGACACGCTCAAACAGTGTGCCCTTATCTCCAAAAGTGCGGGTGGG 2057
Query 53423 ATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480
|||||| | || || || | | | || || ||||| ||| || || || |
Sbjct 2056 ATCGGTCT-CAATGTTC-ATTGTATTCGGAGTAAGGGCACGTTCATCGCCGGCACCAATG 1999
Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540
| | | |||| | || || ||||| || |||||||||| ||| || || || ||
Sbjct 1998 GGGAGTCGAATGGTCTTGTACCGATGCTGCGAGTCTTCAACAGCACTGCTCGTTATGTAG 1939
Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595
|||| ||||| || || || | ||||| ||||||| ||||| |||||
Sbjct 1938 ACCAAGGTGGGAACAAACGACCTGGCGCCTTCGCTGTCTACCTTGAGCCATGGCA 1884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547010171541800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |