Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq210 125 4e-24 seq30086 122 5e-23 seq2251 96.9 2e-15 seq10174 93.3 3e-14 >seq210 Length=64943 Score = 125 bits (138), Expect = 4e-24 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | ||| | ||| ||||| ||||||||||||||| || || || Sbjct 30372 CCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGAC 30431 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || ||||| |||||||| |||||||| |||||||| || Sbjct 30432 AGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 30491 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | |||||||||||| ||| || | || || | || | ||| ||| ||||| Sbjct 30492 ATGCCCTCCTTGTCT-TGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCG-GCTCCA 30549 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || || || || | ||| |||||||| || |||||| Sbjct 30550 CCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCATG 30599 Score = 122 bits (134), Expect = 5e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| | ||| ||||||||| || || || || || Sbjct 30599 GCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGA 30658 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || | ||||| | || |||||||| || |||||||||||||||||||| || Sbjct 30659 CAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 30718 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | |||||||||||| |||| || | || || | || | || ||| | ||| Sbjct 30719 AATGCCCTCCTTGTCTTGGATC-TTCGCCTTCACATTCTCTATCGAGTCACTTGG--CTC 30775 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| ||||| || || || ||||| |||||||| || |||||| Sbjct 30776 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 30827 Score = 122 bits (134), Expect = 5e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| ||||| ||||||||| || || || || || Sbjct 39709 GCCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGA 39650 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || ||||| |||||||| |||||||| |||||||| || Sbjct 39649 CAGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGG 39590 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | |||||||||||| ||| ||| | || || | || | || ||| | ||| Sbjct 39589 AATGCCCTCCTTGTCTTGGAT-TTTCGCCTTCACATTCTCTATCGAGTCACTTGG--CTC 39533 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| ||||| || || || | ||| |||||||| || |||||| Sbjct 39532 CACCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCATG 39481 Score = 122 bits (134), Expect = 5e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| | ||| ||||||||| || || || || || Sbjct 40165 GCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGA 40106 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || | ||||| | || |||||||| || |||||||||||||||||||| || Sbjct 40105 CAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 40046 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | |||||||||||| |||| || | || || | || | || ||| | ||| Sbjct 40045 AATGCCCTCCTTGTCTTGGATC-TTCGCCTTCACATTCTCTATCGAGTCACTTGG--CTC 39989 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| ||||| || || || ||||| |||||||| || |||||| Sbjct 39988 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 39937 Score = 120 bits (132), Expect = 2e-22 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| | ||| ||| ||||||||||| || || || Sbjct 39481 GCCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGA 39422 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || || || ||||| || ||||||||||||||||| || Sbjct 39421 CAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGG 39362 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | |||||||||||| |||| || | || || | ||| | || ||| | ||| Sbjct 39361 AATGCCCTCCTTGTCTTGGATC-TTCGCCTTCACATTCTCAATCGAGTCACTTGG--CTC 39305 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| |||| || || || || || || |||||||||||||| || ||||| Sbjct 39304 CACCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 109 bits (120), Expect = 3e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| || || |||||||| || || || || || Sbjct 30827 GCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGA 30886 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || |||||||| || ||||||||||| || |||||||| Sbjct 30887 CAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGG 30946 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||||| |||| ||| | || | ||| || Sbjct 30947 GATGCCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAAC 31006 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 ||||| || || || || || |||| ||| |||||||| || |||||| ||| Sbjct 31007 TTCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATGATGA 31059 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| || || |||||||| || || || || || Sbjct 39937 GCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGA 39878 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || |||||||| || ||||||||||| || |||||||| Sbjct 39877 CAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGG 39818 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| || | || || | ||| | || | ||||| Sbjct 39817 GATGCCCTCCTTGTCT-TGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCA 39759 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || || || || || |||| ||| |||||||| || |||||| Sbjct 39758 CCTCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 104 bits (114), Expect = 1e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| | ||||| ||||||||| || || ||||||||||||||| || || || Sbjct 42399 GCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGA 42340 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || | |||||||| ||||| || | ||| ||||||||||| || Sbjct 42339 CAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGG 42280 Query 34599 CACTCCCTCCTTGTC 34613 | ||||||||||| Sbjct 42279 AATGCCCTCCTTGTC 42265 >seq30086 Length=500 Score = 122 bits (134), Expect = 5e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| | ||| ||||||||| || || || || || Sbjct 129 GCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGA 188 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || | ||||| | || |||||||| || |||||||||||||||||||| || Sbjct 189 CAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 248 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | |||||||||||| |||| || | || || | || | || ||| | ||| Sbjct 249 AATGCCCTCCTTGTCTTGGATC-TTCGCCTTCACATTCTCTATCGAGTCACTTGG--CTC 305 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| ||| ||||| || || || ||||| |||||||| || |||||| Sbjct 306 CACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 357 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | ||||||||| || || |||||||| || || || || || Sbjct 357 GCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGA 416 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | ||||| | || |||||||| || ||||||||||| || |||||||| Sbjct 417 CAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGG 476 Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||||||| ||||| Sbjct 477 GATGCCCTCCTTGTCTTGAATCTT 500 >seq2251 Length=6394 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || | ||| || | |||||| || |||||||||||||| || || || Sbjct 1230 CCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAG 1171 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||||| | || || | || || |||||||| || | || || ||||| || || Sbjct 1170 AGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGT 1111 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTC 34655 | |||||||||||| ||| ||| | ||| ||| | ||| | | ||||| ||| Sbjct 1110 ATGCCCTCCTTGTCT-TGAATTTTCGCTTTGACGTTCTCAATAGAG---TCGCTAGGCTC 1055 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || | || || ||||| || || | ||||| |||||||| ||||| || Sbjct 1054 AACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq10174 Length=1708 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||| | ||| || || |||||| ||||| || || || || Sbjct 1041 CCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGAC 1100 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | | ||| | ||||| | ||| || || ||||| || | |||||| |||||||| || Sbjct 1101 AAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGG 1160 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||| ||||| || || | ||| | ||| || || Sbjct 1161 ATACCCTCCTTGTCT-TGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAAC 1219 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || ||||| | ||||| |||||||||||||| Sbjct 1220 CTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314614177935203