Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq30086 86.0 4e-12 seq210 86.0 4e-12 seq2251 82.4 5e-11 >seq30086 Length=500 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || || || ||||| || ||||| || || ||||| Sbjct 263 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 204 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| | Sbjct 203 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 144 Query 28003 CGTTTGCGTGGCGGC 28017 || | ||||| ||| Sbjct 143 CGACTTCGTGGTGGC 129 >seq210 Length=64943 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || || || ||||| || ||||| || || ||||| Sbjct 30733 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 30674 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| | Sbjct 30673 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 30614 Query 28003 CGTTTGCGTGGCGGC 28017 || | ||||| ||| Sbjct 30613 CGACTTCGTGGTGGC 30599 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || |||| ||| || || || ||||| || ||||| || || ||||| Sbjct 40031 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 40090 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| | Sbjct 40091 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 40150 Query 28003 CGTTTGCGTGGCGGC 28017 || | ||||| ||| Sbjct 40151 CGACTTCGTGGTGGC 40165 >seq2251 Length=6394 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845 |||||||||||||||||| ||||| |||||||||||| || || |||| || || Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059 Query 27846 CACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGA 27905 | |||| | | | |||||| ||||| ||||| || || | || || Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119 Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965 |||||||| | || |||||||| || || ||||| || | || | | ||||| || Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 27966 CAACATCCAAAAAGA 27980 |||||| ||||| || Sbjct 1180 CAACATTCAAAAGGA 1194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355731893136357