Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq30086 86.0 4e-12
seq210 86.0 4e-12
seq2251 82.4 5e-11
>seq30086
Length=500
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| || || |||| ||| || || || ||||| || ||||| || || |||||
Sbjct 263 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 204
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| |
Sbjct 203 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 144
Query 28003 CGTTTGCGTGGCGGC 28017
|| | ||||| |||
Sbjct 143 CGACTTCGTGGTGGC 129
>seq210
Length=64943
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| || || |||| ||| || || || ||||| || ||||| || || |||||
Sbjct 30733 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 30674
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| |
Sbjct 30673 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 30614
Query 28003 CGTTTGCGTGGCGGC 28017
|| | ||||| |||
Sbjct 30613 CGACTTCGTGGTGGC 30599
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| || || |||| ||| || || || ||||| || ||||| || || |||||
Sbjct 40031 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 40090
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||||| |||||| || ||||| || ||||| ||| |||||||||||||| |
Sbjct 40091 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGTGCTT 40150
Query 28003 CGTTTGCGTGGCGGC 28017
|| | ||||| |||
Sbjct 40151 CGACTTCGTGGTGGC 40165
>seq2251
Length=6394
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845
|||||||||||||||||| ||||| |||||||||||| || || |||| || ||
Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059
Query 27846 CACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGA 27905
| |||| | | | |||||| ||||| ||||| || || | || ||
Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119
Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTA 27965
|||||||| | || |||||||| || || ||||| || | || | | ||||| ||
Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179
Query 27966 CAACATCCAAAAAGA 27980
|||||| ||||| ||
Sbjct 1180 CAACATTCAAAAGGA 1194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355731893136357
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |