Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq30086 123 6e-23
seq210 123 6e-23
>seq30086
Length=500
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || | || | ||| ||||| ||||| || || || || | | |||
Sbjct 135 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 194
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| |||||| || |||||||| | || |||||||| || |||| ||
Sbjct 195 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 254
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTC 211069
|||||||| |||||||| ||||| || || || | |||| ||| || |||||
Sbjct 255 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCA---CTTGGCTCCACCTC 311
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || |||||||| || || | ||||| ||||| | |||||
Sbjct 312 CAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356
>seq210
Length=64943
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || | || | ||| ||||| ||||| || || || || | | |||
Sbjct 30605 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 30664
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| |||||| || |||||||| | || |||||||| || |||| ||
Sbjct 30665 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 30724
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTC 211069
|||||||| |||||||| ||||| || || || | |||| ||| || |||||
Sbjct 30725 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCA---CTTGGCTCCACCTC 30781
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || |||||||| || || | ||||| ||||| | |||||
Sbjct 30782 CAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || | || | ||| ||||||||||| ||||| || || | || ||
Sbjct 39475 ACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGT 39416
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| |||||| ||||| ||||| | || |||||||| || |||| ||
Sbjct 39415 ACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCC 39356
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTC 211069
|||||||| |||||||| ||||| || || || | |||| ||| || |||||
Sbjct 39355 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCA---CTTGGCTCCACCTC 39299
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| ||||| | || || ||||| | |||||
Sbjct 39298 CAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| || || | || | ||| ||||| ||||| || || || || | | |||
Sbjct 40159 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 40100
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| |||||| || |||||||| | || |||||||| || |||| ||
Sbjct 40099 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 40040
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTC 211069
|||||||| |||||||| ||||| || || || | |||| ||| || |||||
Sbjct 40039 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCA---CTTGGCTCCACCTC 39983
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || |||||||| || || | ||||| ||||| | |||||
Sbjct 39982 CAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||| || ||||| ||||| ||||| ||||| || || | || ||
Sbjct 30377 ACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGT 30436
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||||||||| || || || || | || || ||||| || |||| ||
Sbjct 30437 GCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCC 30496
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || ||||| ||||| || || || | |||| || ||||| |
Sbjct 30497 CTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAA 30556
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || ||||| ||||| | |||||
Sbjct 30557 GGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| || ||||| ||||| ||||| || |||| || || | || || |||| |||
Sbjct 42374 TGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCGTCCTCCAACTGT 42315
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| || ||||||||||| || |||| || ||||||||||| |||||
Sbjct 42314 TTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTTC 42255
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||||| || || || | ||| || ||||| || || |||||||| || ||
Sbjct 42254 GCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATCGTCTTGCCAGTA 42195
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
||||| || || || | |||||
Sbjct 42194 AGAGTTTTGACGAAGATTTGCAT 42172
Score = 95.1 bits (104), Expect = 3e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||||||||| |||||| || |||||||| | || || ||||| || ||||
Sbjct 40330 GGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGGTCCGGTGGAAT 40271
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| |||||||| || ||||| ||||| || || || | |||| || |||||
Sbjct 40270 GCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTC 40211
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| || || ||||| ||||| || ||||| ||||| | |||||
Sbjct 40210 CAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 40166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158705099451215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |