Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 131 1e-25
seq210 102 6e-17
seq10174 98.7 7e-16
seq30086 84.2 1e-11
>seq2251
Length=6394
Score = 131 bits (144), Expect = 1e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666
||||||||| ||||| ||||||||||| || || ||||| |||||||| || ||||| |
Sbjct 1000 TAAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCC 1059
Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||| || |||| | | ||| |||||| ||||| || || |||| |||||
Sbjct 1060 TAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| || || | || ||||||||||| || |||| || | || ||| | ||| ||
Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||||| ||||| || || || | ||| | ||||| || | |||||||||
Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACTACGAGGAGGA 1231
>seq210
Length=64943
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || || ||||| || || || ||||| |||||||| |||
Sbjct 31054 ATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCCAGT 30995
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| | |||| | |||| || ||| ||||| || || | ||||| |||||
Sbjct 30994 GATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 30935
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||||||||| || ||||| || || ||||||| | |||||| | ||| |||||
Sbjct 30934 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 30875
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|||||||| || || || | ||||| ||
Sbjct 30874 ATACAAAAGGAATCGACCCTTCATTTGGT 30846
Score = 84.2 bits (92), Expect = 1e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| || || | || || || |||||||||||||| || ||||| || || |||||
Sbjct 30733 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 30674
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819
|| | |||||| || || ||||| |||||||| ||||| || || ||||| ||
Sbjct 30673 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGT 30618
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || || || || || || || || || || || || |||
Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| | |||| ||| | || | || | || ||||| || || | ||||| |||||
Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGA-TTCAAGACAAGGAGGGCATCCCGCCGGATCA 39828
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||||||| || ||||| || || ||||||| | |||||| | ||| |||||
Sbjct 39829 GCAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAA 39888
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
|||||||| || || || | ||||| ||
Sbjct 39889 TATACAAAAGGAATCGACCCTTCATTTGGT 39918
Score = 84.2 bits (92), Expect = 1e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| || || | || || || |||||||||||||| || ||||| || || |||||
Sbjct 40031 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 40090
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819
|| | |||||| || || ||||| |||||||| ||||| || || ||||| ||
Sbjct 40091 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGT 40146
>seq10174
Length=1708
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||| ||||| || || || ||||| || || ||||| | |
Sbjct 1267 ATGCAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCT 1208
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||| || |||| ||| | || | ||||||| ||||| || ||| | || || || ||
Sbjct 1207 GACTCTATTGAGAATGTGAAGGC-AAAAATTCAAGACAAGGAGGGTATCCCTCCGGACCA 1149
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| ||||| ||| | ||||| | || | || ||| |||||
Sbjct 1148 GCAGCGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTCCTTGTCCGACTACAA 1089
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 1088 TATTCAGAAGGAGTCAAC 1071
>seq30086
Length=500
Score = 84.2 bits (92), Expect = 1e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| || || | || || || |||||||||||||| || ||||| || || |||||
Sbjct 263 GACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAA 204
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819
|| | |||||| || || ||||| |||||||| ||||| || || ||||| ||
Sbjct 203 GATGGACGCACCTTGTCTGACTACAATATACAAAAGGAGTCGACTTTGCATTTGGT 148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337885640366228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |