Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq30086 134 3e-26 seq10174 134 3e-26 seq210 134 3e-26 seq2251 122 2e-22 >seq30086 Length=500 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || | ||| || || ||||| | |||||| || | ||| || Sbjct 135 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 194 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || |||||||| || ||||| || Sbjct 195 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 254 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||||||| || || | ||| | ||||| || || Sbjct 255 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAA 314 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| ||||| || || | || | |||||| Sbjct 315 GGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || || || ||||| ||||| | |||||| |||| || ||| Sbjct 363 ACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGT 422 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || || || || ||||| || || Sbjct 423 GCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCC 482 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||||||||||| ||||| Sbjct 483 CTCCTTGTCTTGAATCTT 500 >seq10174 Length=1708 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || || || || || || || | |||||| |||| ||| | Sbjct 1046 ACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGA 1105 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||||| ||||| ||||| || ||||| || || ||||| || || ||||| Sbjct 1106 CCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACC 1165 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || ||| ||||||| || || | ||| || | ||| || || | Sbjct 1166 CTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAG 1225 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | |||||| Sbjct 1226 GGTGATGGTCTTGCCGGTGAGAGTTTT 1252 >seq210 Length=64943 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || | ||| || || ||||| | |||||| || | ||| || Sbjct 30605 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 30664 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || |||||||| || ||||| || Sbjct 30665 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 30724 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||||||| || || | ||| | ||||| || || Sbjct 30725 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAA 30784 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| ||||| || || | || | |||||| Sbjct 30785 GGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || | ||| || |||||||| | ||||| || | || ||| Sbjct 39475 ACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGT 39416 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || || ||||| | || |||||||| || ||||| || Sbjct 39415 ACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCC 39356 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||||||| || || | ||| | ||||| || || Sbjct 39355 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAA 39296 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||||||||| ||||| | || | |||||| Sbjct 39295 TGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || | ||| || || ||||| | |||||| || | ||| || Sbjct 40159 ACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGT 40100 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || |||||||| || ||||| || Sbjct 40099 GCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCC 40040 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||||||| || || | ||| | ||||| || || Sbjct 40039 CTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAA 39980 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| ||||| || || | || | |||||| Sbjct 39979 GGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || ||||| || || ||||| | |||||| |||| || ||| Sbjct 39703 ACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGT 39644 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || || || || | || || ||||| || ||||| || Sbjct 39643 GCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCC 39584 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||| || ||||||| || || | ||| | ||||| || || Sbjct 39583 CTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAA 39524 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| |||| || || | || | |||||| Sbjct 39523 GGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || || || ||||| ||||| | |||||| |||| || ||| Sbjct 39931 ACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGT 39872 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || || || || ||||| || || Sbjct 39871 GCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCC 39812 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||||||| || |||| || || ||||| || | Sbjct 39811 CTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAG 39752 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | || | |||||| Sbjct 39751 TGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || ||||| || || ||||| | ||||| || | || ||| Sbjct 30377 ACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGT 30436 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || || || || | || || ||||| || ||||| || Sbjct 30437 GCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCC 30496 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||||||| || || | ||| | ||||| || || Sbjct 30497 CTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAA 30556 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||| | || || | || | |||||| Sbjct 30557 GGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 107 bits (118), Expect = 5e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || || || ||||| ||||| | |||||| |||| || ||| Sbjct 30833 ACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGT 30892 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || |||||||| | || || || || ||||| || || Sbjct 30893 GCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCC 30952 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| ||||| ||| ||| || |||| || || || || || | Sbjct 30953 CTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAG 31012 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| ||||| | || || | || | |||||| Sbjct 31013 AGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || || || ||||| | ||||| || | || ||| | || || || | ||| Sbjct 42374 TGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCGTCCTCCAACTGT 42315 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| || ||||||||||| || ||||| || |||||||| || ||||| Sbjct 42314 TTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTTC 42255 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||||||| || || | || | ||||| || | || ||||||||||| || Sbjct 42254 GCCTTCACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATCGTCTTGCCAGTA 42195 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | |||||| | ||| | |||||| Sbjct 42194 AGAGTTTTGACGAAGATTTGCAT 42172 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 225534 ATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTG 225593 |||||| || | ||| || | |||||||| | |||||| || |||||||| | || || Sbjct 40345 ATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTG 40286 Query 225594 TTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 ||||| || ||||| || ||||||||||| ||||| ||||||| || || | ||| Sbjct 40285 CTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTC 40226 Query 225654 TGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||||| || || || || ||||| ||||| | || || | || | |||||| Sbjct 40225 ACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 40166 >seq2251 Length=6394 Score = 122 bits (134), Expect = 2e-22 Identities = 164/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||||| ||||| ||||| || ||||| ||||| | ||||| |||| | |||| Sbjct 1224 CGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTT 1165 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||| || | |||||| || || |||||||||||||| ||||| || || || || Sbjct 1164 CGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCC 1105 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| || ||| || || || || || | ||| | || || || | Sbjct 1104 TCCTTGTCTTGAAT-TTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAG 1046 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 ||||| || || || || | ||||| | || | |||||||||| Sbjct 1045 AGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTTA 1000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192071430403154