Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 214 2e-50
>seq4589
Length=3505
Score = 214 bits (236), Expect = 2e-50
Identities = 514/769 (67%), Gaps = 14/769 (2%)
Strand=Plus/Plus
Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432
||||| || ||||| ||||| ||| ||||| | ||| || || || || || ||
Sbjct 2207 AAGCAGCCGATCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGAT 2266
Query 4433 TA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491
| ||| ||||||| || | ||| | || || |||||| | ||||| || || |
Sbjct 2267 AAGATCG-ACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCA 2325
Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACG 4551
| || || | | | | ||| | |||||||| || | || || | || |||||
Sbjct 2326 TAATGTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACG 2385
Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611
|||| || || | ||||| || | || ||||| |||||| || || | || |
Sbjct 2386 CAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAG 2445
Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671
|||| | ||| | ||| || |||||||| |||| ||||| || || || ||||| | |
Sbjct 2446 GCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACAC 2505
Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATC 4730
| || | || || || || || | || || |||| || ||| || | ||
Sbjct 2506 CCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGA-TC 2564
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | |||||| | || || || ||||| || | || | || |||||||||
Sbjct 2565 CACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAAT 2624
Query 4791 AAT---TTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847
|| | || | | | ||||| | | ||| || || || || || |||||||
Sbjct 2625 AAAAAATCACGCTCTGCC---GGGTCCTTGACATATGTATCGATCAGAAGAGAATACATT 2681
Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907
|||||||| || || || | || | || | ||| ||||| || | ||| || | |||
Sbjct 2682 TCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACT 2741
Query 4908 TGAACTTCGTTACAAAATCTTTCTA--CTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965
||||||||||||||||| ||| | ||| |||||||| || || || ||||| ||||
Sbjct 2742 TGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTG 2799
Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025
|||| || |||| ||||| || ||||||| |||| || || || |||| ||| |
Sbjct 2800 CAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAAT 2859
Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085
|| | ||| || | ||||||||| || ||||| |||||||| || || | ||||| |
Sbjct 2860 CGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCT 2919
Query 5086 TGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
| || | |||||| ||| |||| || || || | | |||||||||
Sbjct 2920 TATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426892986365303
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |