Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4589 214 2e-50 >seq4589 Length=3505 Score = 214 bits (236), Expect = 2e-50 Identities = 514/769 (67%), Gaps = 14/769 (2%) Strand=Plus/Plus Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432 ||||| || ||||| ||||| ||| ||||| | ||| || || || || || || Sbjct 2207 AAGCAGCCGATCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGAT 2266 Query 4433 TA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491 | ||| ||||||| || | ||| | || || |||||| | ||||| || || | Sbjct 2267 AAGATCG-ACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCA 2325 Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACG 4551 | || || | | | | ||| | |||||||| || | || || | || ||||| Sbjct 2326 TAATGTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACG 2385 Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611 |||| || || | ||||| || | || ||||| |||||| || || | || | Sbjct 2386 CAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAG 2445 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||| | ||| | ||| || |||||||| |||| ||||| || || || ||||| | | Sbjct 2446 GCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACAC 2505 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATC 4730 | || | || || || || || | || || |||| || ||| || | || Sbjct 2506 CCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGA-TC 2564 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 || || | |||||| | || || || ||||| || | || | || ||||||||| Sbjct 2565 CACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAAT 2624 Query 4791 AAT---TTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847 || | || | | | ||||| | | ||| || || || || || ||||||| Sbjct 2625 AAAAAATCACGCTCTGCC---GGGTCCTTGACATATGTATCGATCAGAAGAGAATACATT 2681 Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907 |||||||| || || || | || | || | ||| ||||| || | ||| || | ||| Sbjct 2682 TCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACT 2741 Query 4908 TGAACTTCGTTACAAAATCTTTCTA--CTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 ||||||||||||||||| ||| | ||| |||||||| || || || ||||| |||| Sbjct 2742 TGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTG 2799 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025 |||| || |||| ||||| || ||||||| |||| || || || |||| ||| | Sbjct 2800 CAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAAT 2859 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085 || | ||| || | ||||||||| || ||||| |||||||| || || | ||||| | Sbjct 2860 CGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCT 2919 Query 5086 TGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 | || | |||||| ||| |||| || || || | | ||||||||| Sbjct 2920 TATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426892986365303