Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4951 111 2e-19
>seq4951
Length=3275
Score = 111 bits (122), Expect = 2e-19
Identities = 177/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 78282 CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCC 78341
|| || || || || | || || || || || || |||| | || ||||| || |||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 78342 TCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 78401
|| |||||||||||| |||| | | | ||| ||||||||||| || || | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461
|| || ||||| | || || || ||||| | ||||| ||| |||| | |||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 78462 GTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521
|| ||||| || | || | ||| ||||| |||| || || ||||| |||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 78522 TGCTGAGGTCTTTC 78535
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 107 bits (118), Expect = 3e-18
Identities = 308/469 (66%), Gaps = 6/469 (1%)
Strand=Plus/Plus
Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATG 77982
|||| || || || ||||| |||| | | ||||||||||||| || ||| || |
Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752
Query 77983 ACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 78042
||| |||| | | ||| | ||||| || ||||| || ||||| || || | |
Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812
Query 78043 ATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCA 78102
| ||||||| | | | || ||| || || ||||| | || | ||| | ||
Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872
Query 78103 TAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTC 78162
| ||| | ||||||||| || || || | || | | ||||||||||| || || |
Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932
Query 78163 CCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAG 78222
| || |||| ||| | || ||| | || | |||| || ||| || | || ||| || |
Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992
Query 78223 ATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC-GAATATTACTAA--TGGATA 78279
| ||||| || || | || ||| | | ||| | | ||||| | || | || |
Sbjct 1993 ACTCCCCATTGGTGCCGGCGATG-AACGTGCCCTTACTCCGAATACAATGAACATTGAGA 2051
Query 78280 TCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATAC 78339
|| || || || || | || || || || || || |||| | || ||||| || |
Sbjct 2052 --CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGC 2109
Query 78340 CCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388
|||| |||||||||||| |||| | | | ||| ||||||||||| ||
Sbjct 2110 CCTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694407509014240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |