Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4951 111 2e-19 >seq4951 Length=3275 Score = 111 bits (122), Expect = 2e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 78282 CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCC 78341 || || || || || | || || || || || || |||| | || ||||| || ||| Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247 Query 78342 TCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 78401 || |||||||||||| |||| | | | ||| ||||||||||| || || | || Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307 Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461 || || ||||| | || || || ||||| | ||||| ||| |||| | ||||||||| Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367 Query 78462 GTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 || ||||| || | || | ||| ||||| |||| || || ||||| ||||| Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427 Query 78522 TGCTGAGGTCTTTC 78535 | ||||||||| || Sbjct 2428 TACTGAGGTCTCTC 2441 Score = 107 bits (118), Expect = 3e-18 Identities = 308/469 (66%), Gaps = 6/469 (1%) Strand=Plus/Plus Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATG 77982 |||| || || || ||||| |||| | | ||||||||||||| || ||| || | Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752 Query 77983 ACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 78042 ||| |||| | | ||| | ||||| || ||||| || ||||| || || | | Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812 Query 78043 ATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCA 78102 | ||||||| | | | || ||| || || ||||| | || | ||| | || Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872 Query 78103 TAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTC 78162 | ||| | ||||||||| || || || | || | | ||||||||||| || || | Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932 Query 78163 CCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAG 78222 | || |||| ||| | || ||| | || | |||| || ||| || | || ||| || | Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992 Query 78223 ATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC-GAATATTACTAA--TGGATA 78279 | ||||| || || | || ||| | | ||| | | ||||| | || | || | Sbjct 1993 ACTCCCCATTGGTGCCGGCGATG-AACGTGCCCTTACTCCGAATACAATGAACATTGAGA 2051 Query 78280 TCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATAC 78339 || || || || || | || || || || || || |||| | || ||||| || | Sbjct 2052 --CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGC 2109 Query 78340 CCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 78388 |||| |||||||||||| |||| | | | ||| ||||||||||| || Sbjct 2110 CCTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694407509014240