Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4589 241 2e-58 seq4951 123 4e-23 >seq4589 Length=3505 Score = 241 bits (266), Expect = 2e-58 Identities = 507/748 (68%), Gaps = 11/748 (1%) Strand=Plus/Plus Query 46500 ACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559 ||||||||| || || || | ||| |||| || || || || || || ||| || | Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 46560 GACAGCATCCG--ATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGT 46617 ||| || |||| ||| | || || ||| |||| | | ||| || | | || Sbjct 2312 GACGGCCTCCGTCATAATGTC-ATAC-ACTCTTTCTGCTGTAGGTTTATTGACAATGTGC 2369 Query 46618 TTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTA 46677 || || |||| ||| ||||| || |||||||||||||| | ||| || | |||||| Sbjct 2370 TTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTA 2429 Query 46678 GAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT 46737 || || || |||||||| || |||||||| ||||||||||| |||| || || || Sbjct 2430 CTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAA 2489 Query 46738 CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA-ACTGGC 46796 || || ||||| | || || | ||| ||||| || || | | ||| |||| || | Sbjct 2490 CCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCC 2549 Query 46797 ATC--ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTT 46854 || ||| |||||| | | |||||||| ||||| || || || |||| ||| Sbjct 2550 CTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTT 2609 Query 46855 TCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAA 46914 | || || ||||| | ||| | || | || || ||||||||||| || | | Sbjct 2610 TGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGA 2669 Query 46915 AGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTT 46974 ||| ||||||||| ||||||||||| |||| |||| || | ||| |||||||| | Sbjct 2670 AGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGA 2729 Query 46975 GCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA--GACAAATTCTCATTCACTATTC 47032 || |||| || || || || ||||||| |||| | ||||| || || || || | Sbjct 2730 GCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGC 2787 Query 47033 CATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA 47092 ||||||| || ||||| || |||| |||| |||||| | | |||| | | | | Sbjct 2788 CATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGA 2847 Query 47093 GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACG 47152 | || | ||| || | | ||| || | || ||| || || ||| | ||||| || || | Sbjct 2848 GATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAG 2907 Query 47153 CCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATC 47212 | | ||||| ||||| | | ||| || ||| ||||||| || || | | ||||||| Sbjct 2908 CGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATC 2967 Query 47213 TATTTGGATTTTTTGCAAGTATAGGTTC 47240 | ||||| |||||| |||||| Sbjct 2968 TTCGAGGATTGGGAACAAGTAAAGGTTC 2995 >seq4951 Length=3275 Score = 123 bits (136), Expect = 4e-23 Identities = 309/467 (66%), Gaps = 2/467 (0%) Strand=Plus/Plus Query 76518 GTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATG 76577 |||| || || || ||||| |||| | | |||||| ||||||| ||| ||| || | Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752 Query 76578 ACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 76637 ||| |||| | | ||||| ||||| || ||||| || ||||| || || | | Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812 Query 76638 ATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCA 76697 | ||||||| | | | || ||| || || ||||| | || | || | || Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872 Query 76698 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTC 76757 | ||| | ||||||||| || || || | || | | || |||||||| || || | Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932 Query 76758 CCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG 76817 | || |||| ||| | |||||| | || | |||| || ||| || | || || || | Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992 Query 76818 ATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC-GAATATTACTAATAGATAGG 76876 | ||||| || || | || ||| | | | | | | ||||| | || | || Sbjct 1993 ACTCCCCATTGGTGCCGGCGATG-AACGTGCCCTTACTCCGAATACAATGAACATTGAGA 2051 Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || || || |||| ||||| || ||||| |||| | ||||| || |||||| Sbjct 2052 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2111 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 76983 || ||||| |||||| |||| | | | ||| ||||||||||| || Sbjct 2112 TCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158 Score = 123 bits (136), Expect = 4e-23 Identities = 178/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCC 76935 ||| || || || || |||| ||||| || ||||| |||| | ||||| || ||||| Sbjct 2187 GCCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCC 2246 Query 76936 CTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 76995 ||| ||||| |||||| |||| | | | ||| ||||||||||| || || | || Sbjct 2247 CTCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGT 2306 Query 76996 TCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTA 77055 || || ||||| | || || || |||||| | ||||| ||| |||| | ||||||||| Sbjct 2307 CCCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTA 2366 Query 77056 TGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 || ||||| | || || | || ||||| |||| | ||| ||||| ||||| Sbjct 2367 CGTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACAT 2426 Query 77116 ATGCTGAGGTC 77126 | |||||||| Sbjct 2427 GTACTGAGGTC 2437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712666238637120