Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq210 149 1e-30 seq30086 147 5e-30 seq10174 141 2e-28 seq2251 131 4e-25 seq1281 95.1 3e-14 >seq210 Length=64943 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| || || |||||||| ||||||||||||| Sbjct 39480 CCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGAC 39421 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || | || || || |||||||||||||| |||||||| ||| Sbjct 39420 AGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGA 39361 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| || || || | || || | ||| | || || Sbjct 39360 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACC 39301 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| |||||||| || || || || || ||||| Sbjct 39300 TCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || ||||| |||| ||| || || || ||||| || |||||||||| | Sbjct 30600 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 30659 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | || || ||||| ||||| ||||| |||||||| || Sbjct 30660 AAG-GTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 30718 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || || | || || | ||| | || || Sbjct 30719 AATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCAC 30778 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || ||||| ||||| || ||||| ||||| Sbjct 30779 CTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || ||||| |||| ||| || || || ||||| || |||||||||| | Sbjct 40164 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 40105 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | || || ||||| ||||| ||||| |||||||| || Sbjct 40104 AAG-GTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 40046 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || || | || || | ||| | || || Sbjct 40045 AATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCAC 39986 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || ||||| ||||| || ||||| ||||| Sbjct 39985 CTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 134 bits (148), Expect = 3e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 282863 AAAACGTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTT 282922 |||| | |||| ||||| || ||||| || ||||| | || || ||||| ||||| Sbjct 30362 AAAAAATCAACCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTT 30421 Query 282923 GTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTG 282982 |||||||| || ||||| ||||| || || || || || ||||| |||||||| || || Sbjct 30422 GTAGTCAGACAGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTG 30481 Query 282983 GTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 ||| ||||| |||||||||||||| ||||| || || || | || || | ||| Sbjct 30482 GTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACT 30541 Query 283043 AGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || | || || ||||| ||||| | ||||| || ||||| ||||| Sbjct 30542 CGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | || ||| ||||| || |||||||| | Sbjct 30828 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 30887 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | || || ||||| ||||| ||||| || || || ||| Sbjct 30888 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 30947 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||| ||||| || ||||| | || || | || | || ||| Sbjct 30948 ATGCCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACT 31007 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| ||||| | ||||| || || || ||||| Sbjct 31008 TCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | || || ||||| || |||||||| | Sbjct 39708 CCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGAC 39649 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | || || || ||||| |||||||| || ||||| ||| Sbjct 39648 AGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 39589 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||||||||| || || || || | || || | ||| | || || Sbjct 39588 ATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACC 39529 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || |||| ||||| || ||||| ||||| Sbjct 39528 TCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||| || || |||| ||| | || || ||||| ||||||||||| | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| | ||||| || |||||||| | |||||||||||| ||| Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || || | || || | || | || || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | ||| || ||||| || ||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 116 bits (128), Expect = 8e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | || ||| ||||| || |||||||| | Sbjct 39936 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 39877 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | || || ||||| ||||| ||||| || || || ||| Sbjct 39876 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 39817 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||| ||||| || || || | || || | || | || || Sbjct 39816 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACC 39757 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | ||||| || ||||| ||||| Sbjct 39756 TCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 116 bits (128), Expect = 8e-21 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||| |||||||||||||| |||||||| | || | || |||||||||| Sbjct 40392 AACCGCCACGCAGGCGAAGAACCAGATGCAGAGT--TNNNNNNNNNNATATTGTAGTCAG 40335 Query 282931 -CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 |||| ||||| ||||| || | || || ||||| ||||| ||||| || ||||| Sbjct 40334 ACAAG-GTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGGTCCGGT 40276 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| |||||||||||||| ||||| || || || | || || | ||| | || Sbjct 40275 GGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCC 40216 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | || || ||||| ||||| | ||||| || ||||| ||||| Sbjct 40215 ACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 40166 >seq30086 Length=500 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || ||||| |||| ||| || || || ||||| || |||||||||| | Sbjct 130 CCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGAC 189 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | || || ||||| ||||| ||||| |||||||| || Sbjct 190 AAG-GTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGG 248 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || || | || || | ||| | || || Sbjct 249 AATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCAC 308 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || ||||| ||||| || ||||| ||||| Sbjct 309 CTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | || ||| ||||| || |||||||| | Sbjct 358 CCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGAC 417 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | || || ||||| ||||| ||||| || || || ||| Sbjct 418 AGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGG 477 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 || |||||||||||||| ||||| Sbjct 478 ATGCCCTCCTTGTCTTGAATCTT 500 >seq10174 Length=1708 Score = 141 bits (156), Expect = 2e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282869 TGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC 282928 || ||||||||| || ||||| || ||||| | ||| || || || || |||||||| Sbjct 1037 TGCACCACCACGAAGACGAAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTC 1096 Query 282929 AG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCAC 282987 | |||| | || ||||| |||| ||| || || ||||| || | ||| || ||||| Sbjct 1097 GGACAAG-GACCGCCCATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCG 1155 Query 282988 CCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTT 283047 || ||||||||||||||||| || ||||| || || | || |||| ||| |||| || Sbjct 1156 GAGGGATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTT 1215 Query 283048 CGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || ||||| ||||| || || | ||| || || || |||||||| Sbjct 1216 CAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 >seq2251 Length=6394 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 || ||||| | ||| ||| ||||| ||||||||||| | || || || |||||||| Sbjct 1212 ACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGCCCATCCTCC 1153 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || ||||||||||| | ||||| ||||| || || |||||||||||||| Sbjct 1152 AACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGA 1093 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| ||| | || |||| ||| || || || || |||||||| || || Sbjct 1092 ATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAACCTCAAGAGTGATGGTTTTC 1033 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || | || ||||| || || |||||||| Sbjct 1032 CCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq1281 Length=11230 Score = 95.1 bits (104), Expect = 3e-14 Identities = 172/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 274608 TGAAGCCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCCA-- 274665 || || || ||||||| ||||| | |||| || | |||| |||| || ||| Sbjct 2018 TGCAGACCCAGAATTTTAATGAGATTGTTGATCTCAGCATTCTCCATGAT-CT-GCCTTG 1961 Query 274666 CAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGC 274725 | | ||| ||||| ||||| |||| ||||| || | ||| || |||||||| | || | Sbjct 1960 CCGGAGCTTCACGAACGTTGAGCAGTTTACCTCGCAAAGGAAAGACGCCATAGCGGTCAC 1901 Query 274726 GCCCGATGACCGAAAGACCGGCGATCGCGAGAG--TTGCTGCTGAATCTCCCTCTGTGAG 274783 |||| | ||| |||||||| | ||| |||| ||| || ||||||||||| ||||| Sbjct 1900 GCCCAACCACCCCGAGACCGGCCACCGCAAGAGACTTG--GCCGAATCTCCCTCAGTGAG 1843 Query 274784 AATCAAAGTACACAACTTACTGTTTTTTGTGCCTGCAAAAGCCGCGTCATTCAGTTTCGG 274843 || | |||||| ||| ||| ||||| |||||| || |||| ||| || || Sbjct 1842 GATAAGAGTACAATACTGGGAGTTCTTTGTCCCTGCATCGTTGGCATCATCCAGCTTTGG 1783 Query 274844 AATACC 274849 ||| || Sbjct 1782 AATCCC 1777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046335639187514