Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4589 239 5e-58 >seq4589 Length=3505 Score = 239 bits (264), Expect = 5e-58 Identities = 409/591 (69%), Gaps = 12/591 (2%) Strand=Plus/Plus Query 23496 CTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555 ||| || | || ||| ||||| || || ||||||||||| | ||| |||| || || Sbjct 2369 CTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTT 2428 Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615 | || || | || ||||| | || || || || | |||||| || | |||||| || Sbjct 2429 ACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGA 2488 Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 ||||| ||||||| |||||||| ||| || || ||||| | ||| | | | | ||| Sbjct 2489 ACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGC 2548 Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----A 23731 | | || | ||||| || || ||||| |||||| ||| || || | Sbjct 2549 CCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTC----TTAGCGACGCATGGCA 2604 Query 23732 TTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAA 23791 |||| ||| || || || | |||| ||| | || | | ||||||||| | Sbjct 2605 GCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGA 2664 Query 23792 TTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAAC 23851 | || | | |||||||||||||||||| || |||| || | || | |||||||||| Sbjct 2665 TCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAAC 2724 Query 23852 ATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAA 23911 | | ||| |||| | |||||| || ||| |||| | | ||||||||||||||| | Sbjct 2725 AACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGA 2784 Query 23912 TACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GT 23969 | |||||||| || |||||||| || |||||||| ||||| |||| |||| || | Sbjct 2785 TGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCAT 2844 Query 23970 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||| | |||| |||||| ||| ||| || | ||||||||| || ||||| |||||||| Sbjct 2845 TGAGA--TTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAA 2902 Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGG 24080 | || | || |||||| | |||||| |||| || ||||||||| Sbjct 2903 AGAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGG 2953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521291848807400