Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 239 5e-58
>seq4589
Length=3505
Score = 239 bits (264), Expect = 5e-58
Identities = 409/591 (69%), Gaps = 12/591 (2%)
Strand=Plus/Plus
Query 23496 CTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555
||| || | || ||| ||||| || || ||||||||||| | ||| |||| || ||
Sbjct 2369 CTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTT 2428
Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615
| || || | || ||||| | || || || || | |||||| || | |||||| ||
Sbjct 2429 ACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGA 2488
Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675
||||| ||||||| |||||||| ||| || || ||||| | ||| | | | | |||
Sbjct 2489 ACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGC 2548
Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----A 23731
| | || | ||||| || || ||||| |||||| ||| || || |
Sbjct 2549 CCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTC----TTAGCGACGCATGGCA 2604
Query 23732 TTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAA 23791
|||| ||| || || || | |||| ||| | || | | ||||||||| |
Sbjct 2605 GCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGA 2664
Query 23792 TTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAAC 23851
| || | | |||||||||||||||||| || |||| || | || | ||||||||||
Sbjct 2665 TCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAAC 2724
Query 23852 ATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAA 23911
| | ||| |||| | |||||| || ||| |||| | | ||||||||||||||| |
Sbjct 2725 AACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGA 2784
Query 23912 TACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GT 23969
| |||||||| || |||||||| || |||||||| ||||| |||| |||| || |
Sbjct 2785 TGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCAT 2844
Query 23970 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
||| | |||| |||||| ||| ||| || | ||||||||| || ||||| ||||||||
Sbjct 2845 TGAGA--TTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAA 2902
Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGG 24080
| || | || |||||| | |||||| |||| || |||||||||
Sbjct 2903 AGAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGG 2953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521291848807400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |