Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq210 120 2e-22 seq2251 105 5e-18 seq30086 100 2e-16 >seq210 Length=64943 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || || || ||||||||| |||||||| || | || ||| | || || Sbjct 30389 CACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTC 30448 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || ||||| |||||||||||||| || | || | || ||||| || Sbjct 30449 CAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTG 30508 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | |||| | ||| | |||||||||| ||||| ||||| Sbjct 30509 AATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTT 30568 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || |||||||| || ||||||||| Sbjct 30569 CCCCGTAAGCGTCTTCACAAATATTTGCATG 30599 Score = 120 bits (132), Expect = 2e-22 Identities = 170/238 (71%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| ||||| || ||||||||| || || Sbjct 39718 TATTTGCATGCCACCACGAAGTCGGAGCACCAAATGAAGAGTCGACTCCTTTTGTATATT 39659 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || ||| | || |||| |||||| || ||||| |||||||||||||| Sbjct 39658 GTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCCGCAAATATCAAACGCTGCTG 39599 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | || ||||| || || ||| ||||| | |||| | ||| Sbjct 39598 GTCCGGTGGAATGCCCTCCTTGTCTTGGATTTTCGCCTTCACATTCTCTATCGAGTCACT 39539 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||||| ||||||||||| || || || |||||||| || ||||||||| Sbjct 39538 TGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAGCGTCTTCACAAATATTTGCATG 39481 Score = 120 bits (132), Expect = 2e-22 Identities = 170/238 (71%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| ||||| || |||||||| || || Sbjct 39946 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATT 39887 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || ||| | || |||| |||||| ||||| ||||| ||||||||||| Sbjct 39886 GTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTG 39827 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||| | || | || ||||| || |||||| ||||| | | |||| || Sbjct 39826 ATCCGGCGGGATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCAATGGAATCACT 39767 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||||| ||||| ||||| || || || |||||||| || ||||||||| Sbjct 39766 GGGCTCCACCTCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 116 bits (128), Expect = 3e-21 Identities = 171/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| ||||| || |||||||| || || Sbjct 30818 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGAAGGGTCGATTCCTTTTGTATATT 30877 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || ||| | || |||| |||||| ||||| ||||| ||||||||||| Sbjct 30878 GTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTG 30937 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||| | || | || ||||| || ||||| ||| | | | |||| || Sbjct 30938 ATCCGGCGGGATGCCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATGGAATCACT 30997 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 || || || |||| ||||| ||||| ||||| || |||||||| |||||||||||||| Sbjct 30998 GGGCTCAACTTCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCACAAAGATTTGCATGAT 31057 Query 44341 G 44341 | Sbjct 31058 G 31058 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || | || ||||| ||||| || ||||||||| |||||||| Sbjct 42405 TTGCATGCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTA 42346 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || ||| |||| |||| ||| || || |||||||| | ||| || || || Sbjct 42345 GTCCGACAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTC 42286 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | || ||||| ||| |||||| ||||| | |||| | || | Sbjct 42285 CGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGG 42226 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| ||||||||||| || || || || || |||||||||||||| Sbjct 42225 CTCCACCTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 100 bits (110), Expect = 2e-16 Identities = 168/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| || | || ||||||||| || || Sbjct 30590 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATT 30649 Query 44161 GTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCT 44219 ||| || | | || || || | || |||| |||||| ||||| ||||| |||||||| | Sbjct 30650 GTAGTCAGACAAGGTG-CGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTT 30708 Query 44220 GATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGG 44279 | || | || | || ||||| || |||||| ||||| | |||| | ||| Sbjct 30709 GGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCAC 30768 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||||| ||||||||||| || || | |||||||| || ||||||||| Sbjct 30769 TTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 30827 Score = 100 bits (110), Expect = 2e-16 Identities = 168/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| || | || ||||||||| || || Sbjct 40174 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATT 40115 Query 44161 GTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCT 44219 ||| || | | || || || | || |||| |||||| ||||| ||||| |||||||| | Sbjct 40114 GTAGTCAGACAAGGTG-CGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTT 40056 Query 44220 GATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGG 44279 | || | || | || ||||| || |||||| ||||| | |||| | ||| Sbjct 40055 GGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCAC 39996 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||||| ||||||||||| || || | |||||||| || ||||||||| Sbjct 39995 TTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 39937 Score = 96.9 bits (106), Expect = 2e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| |||||| ||||| ||||| ||||||||||| || | || | || ||||| Sbjct 40320 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTG 40261 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || |||||| ||||| | |||| | ||| | |||||||||| ||||| Sbjct 40260 TCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATA 40201 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||| || |||||||| || ||||||||| Sbjct 40200 GTCTTCCCCGTAAGCGTCTTCACAAATATTTGCATG 40165 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| || | || ||| ||||| ||||| Sbjct 39490 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTT 39431 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | || || | || |||| |||||| || ||||||||||||||||| || Sbjct 39430 GTAGTCAGACAGAGTACGACCATCTTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTG 39371 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | || ||||| || |||||| ||||| | | || | ||| Sbjct 39370 GTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATCGAGTCACT 39311 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||||| ||||| ||||| ||||| | || ||||| ||||||||||| Sbjct 39310 TGGCTCCACCTCCAATGTAATAGTCTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 >seq2251 Length=6394 Score = 105 bits (116), Expect = 5e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| |||| |||||||| || || || ||||| |||||||| |||||||| |||| Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||| ||| | || |||| |||||| ||||||||||| | || ||||| |||| | Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | || ||||| || || ||| |||| | |||| | || | |||| | || Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTC-GCTTTGACGTTCTCAATAGAGTCGCTAGGCTCA 1054 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || || || || || ||||| || || || |||||||| Sbjct 1053 ACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 >seq30086 Length=500 Score = 100 bits (110), Expect = 2e-16 Identities = 168/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | |||| | ||||| || | || ||||||||| || || Sbjct 120 TATTTGCATGCCACCACGAAGTCGAAGCACCAAATGCAAAGTCGACTCCTTTTGTATATT 179 Query 44161 GTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCT 44219 ||| || | | || || || | || |||| |||||| ||||| ||||| |||||||| | Sbjct 180 GTAGTCAGACAAGGTG-CGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGTT 238 Query 44220 GATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGG 44279 | || | || | || ||||| || |||||| ||||| | |||| | ||| Sbjct 239 GGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCTATCGAGTCAC 298 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||||| ||||||||||| || || | |||||||| || ||||||||| Sbjct 299 TTGGCTCCACCTCCAAGGTAATCGTCTTGCCAGTCAACGTCTTCACAAATATTTGCATG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359858379258147