Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 168 2e-36
seq10174 136 1e-26
seq210 122 2e-22
seq30086 95.1 3e-14
>seq2251
Length=6394
Score = 168 bits (186), Expect = 2e-36
Identities = 175/227 (77%), Gaps = 7/227 (3%)
Strand=Plus/Plus
Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973
|||||||| ||||||| || ||||| || || || ||||| ||||| || ||||| ||
Sbjct 1000 TAAAATGC---AAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGA 1056
Query 177974 AAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031
|| || || | || |||||||||||| || ||||| ||||| || || || ||
Sbjct 1057 --GCCTAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCA 1114
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
|| |||||||||||||||||||| ||||| || ||| | || ||||| | ||||| ||
Sbjct 1115 CCAGACCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCC 1174
Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || ||| | ||||| ||||| || || |||||||||||||||||
Sbjct 1175 GACTACAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACT 1221
>seq10174
Length=1708
Score = 136 bits (150), Expect = 1e-26
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||||||||| || || || |||||||| ||||| ||| || |||
Sbjct 1264 CAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCTGAC 1205
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| || ||||| || || ||| ||||| ||||| || || |||||||||||||||||
Sbjct 1204 TCTATTGAGAATGTGAAGGCAAAAATTCAAGACAAGGAGGGTATCCCTCCGGACCAGCAG 1145
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| ||||| || || || || || | |||||||| || | |||| |||| || || |
Sbjct 1144 CGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTC-CTTGTCCGACTACAATAT 1086
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|| || || ||||| || ||||||||
Sbjct 1085 TCAGAAGGAGTCAACGCTTCATCTTGT 1059
>seq210
Length=64943
Score = 122 bits (134), Expect = 2e-22
Identities = 150/203 (74%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||||| || || || ||||| ||||| |||||||| || ||
Sbjct 42175 CAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGA--GCCGAGTG 42232
Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| | || ||||| || || |||||||||||||| || || || || |||||||| |
Sbjct 42233 ATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAAC 42292
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
|||| || ||||| || || |||||| | || || || | ||||| | || || |||
Sbjct 42293 AACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAACA 42352
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
| ||||| || ||||| || |||
Sbjct 42353 TTCAAAAGGAGTCAACCCTTCAT 42375
Score = 118 bits (130), Expect = 3e-21
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || || || || || || || ||| | |||||||| || ||
Sbjct 30595 CAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGA--GCCGAGTG 30538
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || |||||||| ||||| || || || || ||||||||||
Sbjct 30537 ACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAGC 30478
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | || || || || || ||||| |||||||| | ||||| | || || |||
Sbjct 30477 AGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAACA 30418
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
| ||||| || ||||| |||||||||||
Sbjct 30417 TTCAAAAGGAGTCAACTCTGCATCTTGT 30390
Score = 118 bits (130), Expect = 3e-21
Identities = 149/203 (73%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || || || || || || || || || |||||||| || |||
Sbjct 39713 CAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGA--GCCCAGTG 39770
Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| |||| ||||| || || |||||||| ||||| || || ||||| ||||| ||||
Sbjct 39771 ATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGC 39830
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||||||||| || ||| | |||||||| | ||||| |||| || ||
Sbjct 39831 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 39890
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
| ||||| ||||| || || |||
Sbjct 39891 TACAAAAGGAATCGACCCTTCAT 39913
Score = 109 bits (120), Expect = 1e-18
Identities = 147/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || || || || || || || || || || || || || |||
Sbjct 31051 CAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGA--GCCCAGTG 30994
Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| |||| ||||| || || |||||||| ||||| || || ||||| ||||| ||||
Sbjct 30993 ATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGC 30934
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||||||||| || ||| | |||||||| | ||||| |||| || ||
Sbjct 30933 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 30874
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
| ||||| ||||| || || |||
Sbjct 30873 TACAAAAGGAATCGACCCTTCAT 30851
Score = 96.9 bits (106), Expect = 8e-15
Identities = 124/168 (74%), Gaps = 5/168 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || || || || || || || ||| | |||||||| || ||
Sbjct 40169 CAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGA--GCCGAGTG 40226
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || |||||||| ||||| || || || || ||||||||||
Sbjct 40227 ACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAGC 40286
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
| || | ||||||||||| || ||| | ||||||||| | || ||||
Sbjct 40287 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTG 40333
Score = 95.1 bits (104), Expect = 3e-14
Identities = 146/204 (72%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || | || || || ||||| ||| | |||||||| || ||
Sbjct 30823 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 30766
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || ||||| || ||||| || || || || |||||||| |
Sbjct 30765 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 30706
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100
| || | ||||||||||| || ||| | ||||||||| | || |||| | || || ||
Sbjct 30705 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 30647
Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124
| ||||| || || || |||||
Sbjct 30646 ATACAAAAGGAGTCGACTTTGCAT 30623
Score = 95.1 bits (104), Expect = 3e-14
Identities = 146/204 (72%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || | || || || ||||| ||| | |||||||| || ||
Sbjct 39941 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 39998
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || ||||| || ||||| || || || || |||||||| |
Sbjct 39999 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 40058
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100
| || | ||||||||||| || ||| | ||||||||| | || |||| | || || ||
Sbjct 40059 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 40117
Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124
| ||||| || || || |||||
Sbjct 40118 ATACAAAAGGAGTCGACTTTGCAT 40141
Score = 91.5 bits (100), Expect = 4e-13
Identities = 143/203 (70%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || || || || || ||||| ||| | |||||||| || ||
Sbjct 39485 CAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 39542
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || || || || ||||| || || || || ||||||||||
Sbjct 39543 ACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAGC 39602
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | || || || || || ||| | |||||||| | ||||| |||| || ||
Sbjct 39603 AGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 39662
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
| ||||| || || || || |||
Sbjct 39663 TACAAAAGGAGTCGACTCTTCAT 39685
>seq30086
Length=500
Score = 95.1 bits (104), Expect = 3e-14
Identities = 146/204 (72%), Gaps = 6/204 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || ||||| || | || || || ||||| ||| | |||||||| || ||
Sbjct 353 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 296
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|| | || ||||| || || ||||| || ||||| || || || || |||||||| |
Sbjct 295 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 236
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100
| || | ||||||||||| || ||| | ||||||||| | || |||| | || || ||
Sbjct 235 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 177
Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124
| ||||| || || || |||||
Sbjct 176 ATACAAAAGGAGTCGACTTTGCAT 153
Score = 91.5 bits (100), Expect = 4e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||| ||||| || || ||||| ||||| ||||| || | ||||||||||| ||
Sbjct 500 AAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGCAGCGTTTAATCTTCGCCGGTAAG 441
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||| | |||||||| | ||||| |||| || || | ||||| ||||| || || |||
Sbjct 440 CAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATATACAAAAGGAATCGACCCTTCAT 381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203267112344654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |