Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2251 168 2e-36 seq10174 136 1e-26 seq210 122 2e-22 seq30086 95.1 3e-14 >seq2251 Length=6394 Score = 168 bits (186), Expect = 2e-36 Identities = 175/227 (77%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973 |||||||| ||||||| || ||||| || || || ||||| ||||| || ||||| || Sbjct 1000 TAAAATGC---AAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGA 1056 Query 177974 AAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 || || || | || |||||||||||| || ||||| ||||| || || || || Sbjct 1057 --GCCTAGCGACTCTATTGAGAACGTCAAAGCGAAAATTCAAGACAAGGAGGGCATACCA 1114 Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091 || |||||||||||||||||||| ||||| || ||| | || ||||| | ||||| || Sbjct 1115 CCAGACCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCC 1174 Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||| | ||||| ||||| || || ||||||||||||||||| Sbjct 1175 GACTACAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTGAGACT 1221 >seq10174 Length=1708 Score = 136 bits (150), Expect = 1e-26 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||||||||| || || || |||||||| ||||| ||| || ||| Sbjct 1264 CAGATTTTTGTCAAAACTCTCACCGGCAAGACCATCACCCTTGAGGTTGAACCTTCTGAC 1205 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||||| || || ||| ||||| ||||| || || ||||||||||||||||| Sbjct 1204 TCTATTGAGAATGTGAAGGCAAAAATTCAAGACAAGGAGGGTATCCCTCCGGACCAGCAG 1145 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || ||||| || || || || || | |||||||| || | |||| |||| || || | Sbjct 1144 CGTCTTATTTTTGCTGGCAAGCAATTAGAAGATGGGCGGTC-CTTGTCCGACTACAATAT 1086 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || |||||||| Sbjct 1085 TCAGAAGGAGTCAACGCTTCATCTTGT 1059 >seq210 Length=64943 Score = 122 bits (134), Expect = 2e-22 Identities = 150/203 (74%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||||| || || || ||||| ||||| |||||||| || || Sbjct 42175 CAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGA--GCCGAGTG 42232 Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | | || ||||| || || |||||||||||||| || || || || |||||||| | Sbjct 42233 ATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAAC 42292 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| || ||||| || || |||||| | || || || | ||||| | || || ||| Sbjct 42293 AACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAACA 42352 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 | ||||| || ||||| || ||| Sbjct 42353 TTCAAAAGGAGTCAACCCTTCAT 42375 Score = 118 bits (130), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || || || || || || || ||| | |||||||| || || Sbjct 30595 CAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGA--GCCGAGTG 30538 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || |||||||| ||||| || || || || |||||||||| Sbjct 30537 ACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAGC 30478 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || || || || || ||||| |||||||| | ||||| | || || ||| Sbjct 30477 AGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAACA 30418 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||||| || ||||| ||||||||||| Sbjct 30417 TTCAAAAGGAGTCAACTCTGCATCTTGT 30390 Score = 118 bits (130), Expect = 3e-21 Identities = 149/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || || || || || || || || || |||||||| || ||| Sbjct 39713 CAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGA--GCCCAGTG 39770 Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | |||| ||||| || || |||||||| ||||| || || ||||| ||||| |||| Sbjct 39771 ATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGC 39830 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||||||||| || ||| | |||||||| | ||||| |||| || || Sbjct 39831 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 39890 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 | ||||| ||||| || || ||| Sbjct 39891 TACAAAAGGAATCGACCCTTCAT 39913 Score = 109 bits (120), Expect = 1e-18 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || || || || || || || || || || || || || ||| Sbjct 31051 CAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGA--GCCCAGTG 30994 Query 177984 A--CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | |||| ||||| || || |||||||| ||||| || || ||||| ||||| |||| Sbjct 30993 ATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGC 30934 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||||||||| || ||| | |||||||| | ||||| |||| || || Sbjct 30933 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 30874 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 | ||||| ||||| || || ||| Sbjct 30873 TACAAAAGGAATCGACCCTTCAT 30851 Score = 96.9 bits (106), Expect = 8e-15 Identities = 124/168 (74%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || || || || || || || ||| | |||||||| || || Sbjct 40169 CAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGA--GCCGAGTG 40226 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || |||||||| ||||| || || || || |||||||||| Sbjct 40227 ACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAGC 40286 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 | || | ||||||||||| || ||| | ||||||||| | || |||| Sbjct 40287 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTG 40333 Score = 95.1 bits (104), Expect = 3e-14 Identities = 146/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || | || || || ||||| ||| | |||||||| || || Sbjct 30823 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 30766 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || ||||| || ||||| || || || || |||||||| | Sbjct 30765 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 30706 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | || | ||||||||||| || ||| | ||||||||| | || |||| | || || || Sbjct 30705 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 30647 Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124 | ||||| || || || ||||| Sbjct 30646 ATACAAAAGGAGTCGACTTTGCAT 30623 Score = 95.1 bits (104), Expect = 3e-14 Identities = 146/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || | || || || ||||| ||| | |||||||| || || Sbjct 39941 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 39998 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || ||||| || ||||| || || || || |||||||| | Sbjct 39999 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 40058 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | || | ||||||||||| || ||| | ||||||||| | || |||| | || || || Sbjct 40059 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 40117 Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124 | ||||| || || || ||||| Sbjct 40118 ATACAAAAGGAGTCGACTTTGCAT 40141 Score = 91.5 bits (100), Expect = 4e-13 Identities = 143/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || || || || || ||||| ||| | |||||||| || || Sbjct 39485 CAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 39542 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || || || || ||||| || || || || |||||||||| Sbjct 39543 ACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAGC 39602 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || || || || || ||| | |||||||| | ||||| |||| || || Sbjct 39603 AGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATA 39662 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 | ||||| || || || || ||| Sbjct 39663 TACAAAAGGAGTCGACTCTTCAT 39685 >seq30086 Length=500 Score = 95.1 bits (104), Expect = 3e-14 Identities = 146/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || ||||| || | || || || ||||| ||| | |||||||| || || Sbjct 353 CAAATATTTGTGAAGACGTTGACTGGCAAGACGATTACCTTGGAGGTGGA--GCCAAGTG 296 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || ||||| || || ||||| || ||||| || || || || |||||||| | Sbjct 295 ACTCGATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCGGACCAAC 236 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | || | ||||||||||| || ||| | ||||||||| | || |||| | || || || Sbjct 235 AGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGACGCAC-CTTGTCTGACTACAAT 177 Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124 | ||||| || || || ||||| Sbjct 176 ATACAAAAGGAGTCGACTTTGCAT 153 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||| ||||| || || ||||| ||||| ||||| || | ||||||||||| || Sbjct 500 AAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAGCAGCGTTTAATCTTCGCCGGTAAG 441 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||| | |||||||| | ||||| |||| || || | ||||| ||||| || || ||| Sbjct 440 CAGTTGGAAGATGGTCGCACTCTGTCCGACTACAATATACAAAAGGAATCGACCCTTCAT 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203267112344654