Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1681 89.7 4e-13 >seq1681 Length=28542 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | ||||| ||| | || || ||||||| ||| | | Sbjct 28351 AATGCAAATTTTTGTGAAGACTCTTACTGGTAAAACTATCACTCTCGAAGTTGAGCCAAG 28410 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||| ||||| ||| | || || |||||| ||||| || ||||| || || || || Sbjct 28411 CGATACCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 28470 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||||||||||| ||||||| | | | || ||| || || Sbjct 28471 ACAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGTACCCTCTCCGACTACAA 28530 Query 24170 CATTCAAAAAGA 24181 ||| || ||||| Sbjct 28531 CATCCAGAAAGA 28542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429863113756050