Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1681 82.4 6e-11 >seq1681 Length=28542 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || || || |||||||||||||| | ||| ||| | ||| Sbjct 25028 ATGCAGATTTTTGTAAAGACTCTTACCGGAAAAACCATTACACTTGAAGTCGAGCCTAGC 24969 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || | | | || || || || || || ||||| | || |||||| Sbjct 24968 GATACAATCGAGAATGTTAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAG 24909 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| |||||||||||||| |||| | || || | || || || Sbjct 24908 CAGCGTCTTATCTTTGCAGGCAAACAATTAGAGGATGGCCGCACTTTGTCGGACTACAAT 24849 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||| || ||||| | || |||||||| Sbjct 24848 ATCCAAAAGGAATCTACCCTCCACTTGGTGTTG 24816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425271892229200