Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq109 86.0 4e-12 >seq109 Length=140612 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| ||||| |||||||| || || | ||| || ||||| Sbjct 74860 ATGCAGATTTTTGTCAAAACCTTAACTGGCAAAACTATCACTCTTGAAGTTGAGCCCGCA 74801 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | || | ||| |||||| ||||| |||||| | ||| | | || Sbjct 74800 GATTATATTGAGAATGTGAAGGCTAAAATTCGAGATAAGGAGGGTATTCCTTCAGATCAG 74741 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || || || ||||||||| | |||||| ||| | | |||||||| Sbjct 74740 CAACGTTTGATTTTCGCCGGCAAACAATTGGAAGATGGCCGTACTCTCTCGGATTACAAC 74681 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||||||||| ||||| |||| || ||| | || || || Sbjct 74680 ATCCAGAAGGAATCTACACTTCACTTGGTGTTGCGTCTTCGTGGTGG 74634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358064087774140