Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1114 264 9e-65 seq2654 250 2e-60 seq2258 165 6e-35 seq1956 165 6e-35 seq989 116 3e-20 seq2142 113 3e-19 seq828 107 1e-17 >seq1114 Length=41459 Score = 264 bits (292), Expect = 9e-65 Identities = 984/1512 (65%), Gaps = 34/1512 (2%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || || || || || || |||| |||||| ||||| | || | |||||| | Sbjct 35055 TTTGTGATGGTGATCTTGTTCTCTTTGCCTGTTGACTTATCCACCGCCGACACATTCAAG 35114 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | || || || || ||||| || || || || | | || || Sbjct 35115 ATACCGTTGGCATCAATGTCGAAGGTCACCTCAATCTGTGGAACACCACGAGGCGCTGGC 35174 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || ||| | ||| | |||| || || || ||| | || ||| Sbjct 35175 GGAATTCCAGACAACTCGAATTTGCCCAACAGGTTGTTGTCGCGAGTCATCGCACGCTCA 35234 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | || || || ||| || || ||||| || || || || |||| Sbjct 35235 CCCTCGTACACCTGAATCAGCACACCAGGCTGGTTGTCTGAGTAGGTGGTGAAGG-TCTG 35293 Query 517454 GATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 | | ||| || || || ||||| | | || | | | ||||| | ||||| || Sbjct 35294 CGTCTGTTTGGTCGGGATAGTAGTGTTGCGTTTGATCAGAGTTGTCATCACGCCACCAGC 35353 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || || | ||| || || || |||| ||||| | |||| | || ||| | || Sbjct 35354 AGTCTCCAGACCCAGGGAGAGTGGAGCAACATCCAGGAGGAGCAGATCTTGCACCGCCTC 35413 Query 517573 ATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 | | |||| |||||| | || ||||| | ||| |||||||| || ||||| |||| Sbjct 35414 CGACTTGTCACCAGACAAGA-TGGCAGCTTGCACAGCGGCACCATAGGCCACAGCCTCAT 35472 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTT 517690 | ||||||| | | || | | ||||||||| |||| || | || || | Sbjct 35473 CTGGATTAATGGACTTGTTCAACTCACGACCATTGAAGAAATCCTGCAGCAACTTCTGC- 35531 Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATC 517749 ||||| |||||||||| ||| ||||| || ||||||| ||| || || | | | ||||| Sbjct 35532 ACCTTCGGAATACGAGTTGAACCTCCGACCAATACAACTTCGTGAACG-GAGCTCTTATC 35590 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT-CTAAACAAGTCTG 517808 || || | ||| || | |||| ||||| || || || ||| | || | ||| | Sbjct 35591 CATCTTAGCATCACGTAGAGCTTTCTCAACTGGCTCCAGGGT-GCTACGGAAGAGGTCAG 35649 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 ||| || || || ||| ||| | |||| || || | || || ||||| || || | Sbjct 35650 CACACAGCTCCTCAAATCGAGCCCGGGTAATAG--ACGTGTAGAAGTCAATGCCATCCAT 35707 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 ||| ||||||| ||||| | | ||||| ||| || | | || || | || Sbjct 35708 CAACGAATCAATCTCAATATTGGCCTGAGTGCTGGAACTCAGGGTTCTCTTTGCCCTCTC 35767 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCAAATCTGTTTTATAT 517984 || |||||||| | | || | |||| | || |||| | |||| || | |||| Sbjct 35768 GCAGGCTGTCCTCAAACGACGAATGGCTCT--CTTATTGGTGGTCAAGTCCTTCTTATGC 35825 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTCACCTC 518042 || | |||||| || || ||| | ||| | || | ||| || || || ||||| | Sbjct 35826 TTGCGCTTGAACTCCTCGACAAA--ATGATTCACCATTCGAGAGTCGAAGTCCTCACCAC 35883 Query 518043 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA--GAGACAA 518100 ||| | || | || | || | | |||| || | || ||||||| |||| | Sbjct 35884 CCAGGTGTGTGTCACCAGCAGTTGACTTAACTTCAAAGATGCCGTCTTCAATGGAGAGGA 35943 Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 518160 ||| ||||| || |||||||||| ||| || || || ||||| || | | Sbjct 35944 TGGAG--ACATCGAAAGTACCACCACCCAAATCGAAGATCAGCACATTGCGCTCGGAGCC 36001 Query 518161 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 || || || | ||| || || | ||||| ||||| || ||||| ||||| | | Sbjct 36002 AACCTTCTTGTCCAAACCGTATGCTATGGCAGCTGCAGTAGGCTCATTGATAATACGAAG 36061 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 |||||| | |||| || || ||||| || ||||| || | || || ||||| Sbjct 36062 AACATTCATTCCAGAGATGACGCCAGCATCCTTTGTGGCCTGACGCTGACTGTCATTAAA 36121 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGT 518340 || || ||||| || ||||||||||| || || ||| ||||| || || || || Sbjct 36122 GTAGGCTGGAACCGTGATAACGGCATCTGTCACAGTTTTGCCAATGTATGCCTCGGCTGT 36181 Query 518341 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC 518400 || ||||| || | || | ||| || ||||| | ||| ||||| | |||| ||| Sbjct 36182 TTCCTTCATCTTCTTCAACACCATGGAGGAAATCTCTTC-AGGGAAGAAAGCTT-TCTTC 36239 Query 518401 ATT---TTGATATGATACTTCAAAATATGGTTTATTACCAACA-TTAATAACTTTAAATG 518456 | |||| || || |||| | || || | ||| || || | ||| | Sbjct 36240 TCTCCCTTGA-ATTCAACCTCAATCTTCGGCTT-GCCCTTACAGTTGGCTACATGAAAGG 36297 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 518516 |||| | ||||| || ||| ||| | |||| | ||| | |||||| | || | Sbjct 36298 GCCAATGCTTCATGTCACCTTGTACAGTGGGGTCGTCAAACCTACGACCAATAAGACGCT 36357 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576 | ||||| || | ||| || ||||| || || || | |||| || || ||||| || | Sbjct 36358 TGGCATCGAACACAGTGTTTGTTGGGTTCATAGCTACCTGATTCTTTGCAGCATCACCGA 36417 Query 518577 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 ||||| | || || ||||| || | ||||| ||||| |||||||| || ||||||| Sbjct 36418 TCAGACGCTCGGTATCTGTGAAGGCCACATAACTGGGAGTGGTGCGATTGCCCTGATCAT 36477 Query 518637 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 518696 | ||||| ||||| || || |||| ||| | ||||| || ||| || |||||||| | Sbjct 36478 TAGCAATGATTTCCACCTTTCCATGTTGGAACACACCAACGCAAGAGAAGGTTGTTCCCA 36537 Query 518697 AATCAATACCAA 518708 |||||||||||| Sbjct 36538 AATCAATACCAA 36549 >seq2654 Length=15263 Score = 250 bits (276), Expect = 2e-60 Identities = 702/1063 (66%), Gaps = 20/1063 (2%) Strand=Plus/Plus Query 517660 ACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAA 517718 ||||||||| |||| || | || || | ||||| |||||||||| ||| ||||| | Sbjct 24 ACCATTGAAGAAATCCTGCAGCAACTTCTGC-ACCTTCGGAATACGAGTTGAACCTCCGA 82 Query 517719 CTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCA 517777 | ||||||| ||| || || | | | ||||||| || | ||| || |||| ||| Sbjct 83 CCAATACAACTTCGTGAACG-GAGCTCTTATCCATCTTAGCATCACGTAGGGCTTTCTCA 141 Query 517778 ACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 || || |||||| ||| || | || | |||||||||||| || ||| | || Sbjct 142 ACTGGCTCAAGAGTGCTTCTGAATAGATCAGCACAAAGTTCTTCAAAACGAGCACGTGTG 201 Query 517838 AGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC 517897 | || | |||| | ||||| | ||| ||||||| ||||| | | || | Sbjct 202 ATGGTCGTGTAGAAATCGACGCCTTCCATCAACGAATCAATCTCAATGTTTGCCTGGGCA 261 Query 517898 GAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTT 517957 ||| || | | ||| || | ||||| || || || || | || | |||| | Sbjct 262 CTGGAACTGAGGGTCCTTTTTGCTCTCTCACAAGCAGTTCTCAGACGACGAATGGCTCT- 320 Query 517958 GCTGATTGAT--TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTA 518015 || |||| | |||| || | |||| |||| |||||| || || ||| | || | Sbjct 321 -CTTATTGGTGGTCAAGTCCTTCTTATGCTTTCGCTTGAACTCCTCGACAAAATGAGTCA 379 Query 518016 CAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTT 518075 | | ||| || || || ||||| |||| | || | || | || | | |||| Sbjct 380 CCATTCGAGAGTCGAAGTCCTCACCACCCAGGTGTGTGTCACCAGCAGTTGACTTAACTT 439 Query 518076 GGAAAAGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATC 518133 || | || ||||||| |||| | ||| ||||| || |||||||||| ||| Sbjct 440 CAAAGATGCCGTCTTCAATGGAGAGGATGGAG--ACATCGAAAGTACCACCACCCAAATC 497 Query 518134 AAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGC 518193 || || || || || ||| | | || || || | ||| || || | ||||| Sbjct 498 GAAGATCAGCACGTTGTGTTCGAAGCCAACCTTCTTGTCCAAACCGTAGGCGATGGCAGC 557 Query 518194 AGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTT 518253 ||||| || ||||| ||||| | | |||||| | ||||| ||| || || || || Sbjct 558 CGCAGTAGGCTCATTGATAATACGAAGAACATTCAAACCAGAAATCGCACCGGCGTCCTT 617 Query 518254 AGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC 518313 ||||| || | || || ||||| || || ||||| || ||||||||||| || || Sbjct 618 TGTGGCCTGACGCTGACTGTCATTAAAGTAGGCTGGAACCGTGATAACGGCATCTGTCAC 677 Query 518314 TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 518373 ||| |||| || || || |||| |||||| || ||||| ||| || ||||| Sbjct 678 AGTTTTGCCAAGGTATGCCTCCGCAGTTTCTTTCATCTTTTGTAAAACCATAGAGGAAAT 737 Query 518374 TTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTAT 518432 || || || || | | ||| || | ||| |||||||| | ||| | Sbjct 738 TTCCTC-GGCAAAGAAGGTCTTTTGCTCTCCCTTGTATTCTACTTCAATTTTCGGTCTTC 796 Query 518433 TACCAACATTAATAACTTTAAATGGCCAGTATTTCATAT-CTGATTGA--ACACTTTGGT 518489 ||| |||||| ||| | || ||||||| |||||||| || || | |||| || Sbjct 797 CTCCAGAATTAATCACTCTGAAAGGCCAGTGTTTCATATCCTCCTTCACTACAC---CGT 853 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 ||| ||| | |||||| | || || || || || || || || | ||||| || | Sbjct 854 CATCAAATCGACGACCAATGAGACGCTTCGCGTCGAATATTGTGTTATTGGGATTCATAG 913 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 | | |||| ||||| ||||| || |||||| | || || ||||| || | ||||| Sbjct 914 CTACCTGATTCTTGGCAGCATCACCGATCAGACGCTCGGTGTCTGTGAAGGCCACATAAC 973 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA 518669 ||||| |||||||| || |||||||| ||||| ||||| || || |||| ||| | | Sbjct 974 TGGGAGTGGTGCGATTGCCCTGATCATTAGCAATGATTTCCACCTTTCCATGTTGGAACA 1033 Query 518670 CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 |||| || ||| || |||||||| ||||| ||||||| ||| Sbjct 1034 CACCAACGCAAGAGAAGGTTGTTCCCAAATCGATACCAACAGC 1076 >seq2258 Length=19701 Score = 165 bits (182), Expect = 6e-35 Identities = 394/596 (66%), Gaps = 0/596 (0%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || |||||||||| ||| || || || ||||| || | | || || || | | Sbjct 31 GTACCACCACCCAAATCGAAGATCAGCACATTGCGCTCGGAGCCAACCTTCTTGTCCAAA 90 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || || | ||||| ||||| || ||||| ||||| | | |||||| | || | Sbjct 91 CCGTAGGCGATGGCAGCCGCAGTAGGCTCATTGATAATACGAAGAACATTCATGCCTGAG 150 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | || || || || ||||| || | || ||| || ||||| || ||||||||| Sbjct 151 ATTGTGCCCGCGTCCTTTGTGGCCTGACGCTGGCTATCATTGAAATAGGCTGGAACAGTA 210 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 || || ||||||| ||| || |||| || || ||||| | ||||| || Sbjct 211 ATGACAGCATCAGACACTGTCTTGCCAAGGTAGGCCTCAGCCGTCTCCTTCATCTTCAAC 270 Query 518357 AAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACT 518416 | | ||| || || || | || | | || ||| ||| | || ||| Sbjct 271 AGCACCATGGAGGAGATCTCCTCGGCATAGAATGTCTTCCTTTCGCCCTTGTACTCGACT 330 Query 518417 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476 |||| | ||| || ||| || || || | || ||||||| ||||||||| | Sbjct 331 TCAATCTTTGGCTTGCCTCCAGAGTTGATCACATGGAAGGGCCAGTGTTTCATATCGTCT 390 Query 518477 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 518536 || ||| | | ||||| ||| | ||| || | || |||||||| |||| ||| || Sbjct 391 TGCACAGTCTTGTCATCGAAACGGCGACCGATGAGACGCTTTGCATCGAAAACAGTGTTA 450 Query 518537 GTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 518596 || || || || || | || | ||||| ||||| ||||| || | || || ||||| Sbjct 451 GTCGGGTTCATAGCCACCTGGTTCTTGGCAGCATCGCCAATAAGGCGCTCGGTGTCTGTG 510 Query 518597 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 518656 || | ||||| || || || ||||| || ||||| || ||||||||||| ||||| Sbjct 511 AAGGCGACATAGCTGGGGGTAGTTCGATTGCCCTGATCGTTAGCAATAATTTCGACTTTC 570 Query 518657 CCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || | ||| ||||| | || || ||||| ||||| | ||||||||| | ||| Sbjct 571 CCGTGTTGGAATACAGCGACGCAGGAGAAAGTCGTTCCAAGATCAATACCGACAGC 626 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 ||||| ||||| ||||| || | || || ||||| || | ||||| || || || Sbjct 19698 TTGGCAGCATCGCCAATAAGGCGCTCGGTGTCTGTGAAGGCGACATAGCTGGGGGTAGTT 19639 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 |||||||| |||||||| || || ||||| || ||||||| ||| |||| || || || Sbjct 19638 CGATTACCCTGATCATTAGCGATGATTTCCACCTTACCATGTTGGAATACTCCAACGCAG 19579 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 ||| || |||||||| || ||||||||||| Sbjct 19578 GAAAAGGTAGTTCCTAAGTCTATACCAATAGC 19547 >seq1956 Length=23974 Score = 165 bits (182), Expect = 6e-35 Identities = 940/1482 (63%), Gaps = 24/1482 (2%) Strand=Plus/Plus Query 517243 TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGAC 517302 ||| || ||||| | || | |||| | | ||||| ||||| || | || || || || Sbjct 21788 TGTCGACTTATCCACTGCTGACACACTCAAGATACCGTTGGCGTCGATGTCGAAGGTCAC 21847 Query 517303 TTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAG 517362 |||||||| || || || | | || ||||| || || | ||| | ||| | |||| Sbjct 21848 CTCAATTTGTGGAACACCACGAGGCGCTGGTGGAATTCCATACAACTCGAATTTCCCCAA 21907 Query 517363 ATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGT 517422 |||||| || ||| | | | ||||||||| | | || || || || Sbjct 21908 CAGATTATTGTCACGAGTCATTGCACACTCACCCTCGTACACCTGAATGAACACACAAGG 21967 Query 517423 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTC 517481 || || || || || || || || |||| | | ||| | ||||| ||||| || | Sbjct 21968 CTGGTTGTCCGAGTAGGTGGTGAAGG-TCTGCGTCTGTTTGGATGGAATGGTTGTATTGC 22026 Query 517482 TATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGA 517541 | || | | |||| | |||||| || || || | ||| ||||| | | || | Sbjct 22027 GTTTGATGAGAGCTTTCATCACACCACCAGCAGTCTCCAGACCCAGAGAGAATGATGTAA 22086 Query 517542 CATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCT 517600 |||| | |||| | || || | || | | ||| |||||| | || ||| Sbjct 22087 CATCCAGGAGGAGCAGATCCTGCACCGCCTCCGACTTATCACCGGACAAGA-TGGCAGCT 22145 Query 517601 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 517660 || | ||| ||||| || || ||||| ||||| ||||| | | | || | | | Sbjct 22146 TGCACAGCGGCACCGTAAGCCACAGCCTCATCCGGATTGATGGACTTGTTCAACTCACGA 22205 Query 517661 CCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAAC 517719 |||||||| |||| || || || || | ||||| ||||| || | || || ||||| Sbjct 22206 CCATTGAAGAAATCCTGCAACAACTTCTGC-ACCTTGGGAATGCGGGTCGAACCACCAAC 22264 Query 517720 TAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAA 517778 || || | |||| ||| | | | ||||||| | | ||| | | || || | Sbjct 22265 CAACACGACATCATCGACC-GAGCTCTTATCCATCTCCGCATCACGAAGCGCCTTCTCCA 22323 Query 517779 CGGGTTCAAGACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 | || ||||| ||| | || | ||| | ||| || || || ||| || | |||| Sbjct 22324 CTGGCTCAAGGAT-GCTACGGAAGAGGTCAGCACACAGCTCCTCAAATCGAGTCCGAGTA 22382 Query 517838 AGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAG 517895 | || || | | || || || || || | ||| ||||| | ||||| | | |||| Sbjct 22383 ATAG--ACGTGTGGAAGTCTATACCATCCATCAACGAATCGATATCAATATTGGCCTGAG 22440 Query 517896 TCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT 517955 | ||| || | | ||| || | || || ||||| || || | || | |||| Sbjct 22441 TGCTGGAACTGAGGGTTCTTTTTGCTCTCTCGCAGGCTGTTCTCAGACGACGAATGGCTC 22500 Query 517956 TTGCTGATTGATT--CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGT 518013 | || |||| || ||| || | |||| || | |||||| || ||| || | | Sbjct 22501 T--CTTATTGGTTGTCAAGTCCTTCTTATGCTTGCGCTTGAACTCCTCAGCAAAGTGGTT 22558 Query 518014 TACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTAC 518073 || | ||| || || || ||||| ||||| | || | || | || | | || Sbjct 22559 CACCATTCGAGAGTCGAAGTCCTCACCACCCAAGTGTGTGTCACCAGCAGTTGACTTCAC 22618 Query 518074 TTGGAA-AAGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCAT 518130 | ||| ||||| |||||||| |||| || |||| ||||| | |||||||||| Sbjct 22619 CTCGAAGAAGTC-ATCTTCAATGGAGAGAATAGAG--ACATCGGAAGCACCACCACCCAA 22675 Query 518131 ATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGC 518190 ||| ||||| || ||||| | | | || || || | ||| || || | || Sbjct 22676 ATCGAAAATCAGAACATTGCGCTTAGAGCCAACCTTCTTGTCCAAACCGTAGGCGATGGC 22735 Query 518191 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 518250 ||| ||||| || |||||||| || | | |||||| | || | ||| | ||||| || Sbjct 22736 AGCTGCAGTAGGCTCATTAATTATACGAAGAACATTCAAGCCTGAGATTGTGCCTGCGTC 22795 Query 518251 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGT 518310 || || ||||| | || ||| || || || || ||||||||||| || ||||||| Sbjct 22796 CTTTGTAGCTTGACGCTGGCTATCATTGAAGTAGGCTGGAACAGTAATGACTGCATCAGA 22855 Query 518311 TACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGA 518370 ||| || |||| ||| || || | | |||||| || | | ||| || || Sbjct 22856 CACTGTCTTGCCAAGATAGGCTTCAGCTATCTCTTTCATCTTCAACAGCACCATGGAGGA 22915 Query 518371 AATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT 518430 || | || | | | ||| || | || ||||||| | ||||| Sbjct 22916 GATCTCCTCGGCATAGAACGTCTTCCTCTCGCCCTTGTACTCAACTTCAATCTTCGGTTT 22975 Query 518431 ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTC 518490 |||| || || || | || ||||||| |||||| || ||| || | | ||| Sbjct 22976 GCCACCAGAGTTGATCACATGGAAGGGCCAGTGTTTCATGTCGTCTTGCACCGTCTTGTC 23035 Query 518491 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 || ||| | ||| || | || |||||||| |||| || || || ||||| || || Sbjct 23036 ATCGAAACGGCGACCGATGAGACGCTTTGCATCGAAAACCGTGTTAGTCGGATTCATAGC 23095 Query 518551 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 518610 | || | ||||| ||| | || |||||| | || || || || || | ||||| Sbjct 23096 CACCTGGTTCTTGGCAGCACCGCCGATCAGAAGCTCGGTGTCCGTGAAAGCCACATAGCT 23155 Query 518611 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 518670 || || || |||||||| |||||||| |||||||||| ||||| || | || |||| Sbjct 23156 GGGGGTAGTTCGATTACCCTGATCATTAGCAATAATTTTGACTTTCCCGTGCTGGAATAC 23215 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | | || || ||||| || || | |||||| || | ||| Sbjct 23216 AGCGACGCAGGAGAAAGTCGTCCCAAGATCAATGCCGACAGC 23257 >seq989 Length=45875 Score = 116 bits (128), Expect = 3e-20 Identities = 380/584 (65%), Gaps = 10/584 (2%) Strand=Plus/Plus Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 |||||| | ||||| || |||||||||| ||| || | ||| | ||| | || Sbjct 31550 CAAAAGGGAGACATCGAACGTACCACCACCCAAATCGAAGACAAGGATGTTCTTCTCGCC 31609 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | ||| | ||||| | |||||| |||| ||| |||||||||||||| || || || | Sbjct 31610 GCCTT---TCTTATCCAAACCATAGGCAATAGCTGCAGCAGTTGGTTCGTTGATGATACG 31666 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 | || | | | | ||| || ||||||||||| || ||||| | || | ||| || Sbjct 31667 AAGAATAGTTAAATTAGCGATAGCACCTGCATCTTTGGTTGCTTGACGCTGAGCATCATT 31726 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 |||||| || |||||||||| ||||||| || || | |||| | || || || Sbjct 31727 AAAATAGGCTGGAACAGTAACTACGGCATGGGTAACCTTGGTACCGAGGTAGGCCTCAGC 31786 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGA 518397 | | |||||||| | |||| ||| | ||||| | ||| || | | | ||| || Sbjct 31787 AATCTCCTTCATTTTGCCCAAAACCATGGCTGAAACCTCTTCAGGAGCGAAAT-CTTTGA 31845 Query 518398 T-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATG 518456 | ||| || | || | |||||||| || | | |||| | || | Sbjct 31846 TCTCACCACGAACTTCAGCTCGCATGTATGGTTTGTTGTTCTTTTCGACAACTGTGAAGG 31905 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 518516 | | ||| ||||| || ||| | || | ||| | ||| || | || | Sbjct 31906 GATATCTTTTGATATCACCCTGCACATCCTTATCGTCAAAGGACCGACCGATAAGACGCT 31965 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATT-AATTGCAGCTTGATATTTGGCTGCATCTCCA 518575 | ||||| || | ||||| | ||||| || ||| ||||| || || || || || Sbjct 31966 TCGCATCGAAGAGGGTATTTTTAGGATTCGATGTCAG-TTGATTCTTCGCAGCGTCACCG 32024 Query 518576 ATCAGATGTT---CTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 || ||| ||| ||| ||| || | || |||||||| || | |||||||| ||| Sbjct 32025 ATTAGACGTTCACCTGCGGTTGTGAAAGCGACGTATGATGGCGTGATACGATTACCCTGA 32084 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 518676 ||||| ||||| ||||||||| ||||| || | ||||| || Sbjct 32085 TCATTTGCAATGATTTCAACTCGTCCATTCTGGAAAACACCGAC 32128 >seq2142 Length=21334 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 668850 TAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTG 668909 ||| ||| |||| |||||||||||||| || |||||||| |||||||| ||| | |||| Sbjct 16709 TAAAAGGCAAAGCTGGTCGTATTAGAGGTAACTTGATGGGCAAACGTGTTGATTTTTCTG 16650 Query 668910 CACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTA 668969 | || ||||| ||||| ||||||| || | || || || ||||||| ||||||| | Sbjct 16649 CTCGAACAGTCATTACCGCTGATCCTAACTTGGCCCTTGATCAAGTTGGAGTTCCTCGTT 16590 Query 668970 TTATTGCTAAAAATCTTACTTT 668991 ||||| | ||||| ||||| Sbjct 16589 CGATTGCCCAGAATCTCACTTT 16568 >seq828 Length=53434 Score = 107 bits (118), Expect = 1e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518170 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 518229 ||| | ||| || |||| ||||||||| || ||||| || || | | | |||||| || Sbjct 2377 ATCTAAACCGTAAGCAAGAGCAGCAGCTGTAGGTTCGTTGATGACACGAAGAACATTTAG 2436 Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 |||| |||| || ||||||||||| ||||| | ||||||||| || ||||| || || Sbjct 2437 TCCAGAAATTTGACCAGCATCTTTAGTAGCTTGACGTTGTGAATCATTGAAATAAGCGGG 2496 Query 518290 AACAGTAATAACGGCAT 518306 |||||||| ||||||| Sbjct 2497 GACAGTAATGACGGCAT 2513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780132139980460