Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1681 98.7 2e-15 >seq1681 Length=28542 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||| || | || |||||||| ||||| |||| || || | || || Sbjct 25027 TGCAGATTTTTGTAAAGACTCTTACCGGAAAAACCATTACACTTGAAGTCGAGCCTAGCG 24968 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || || || ||||| ||||| || ||||| | Sbjct 24967 ATACAATCGAGAATGTTAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAGC 24908 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || |||||||| ||||||||||| ||| | || || | || || |||| Sbjct 24907 AGCGTCTTATCTTTGCAGGCAAACAATTAGAGGATGGCCGCACTTTGTCGGACTACAATA 24848 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || |||| || || || || Sbjct 24847 TCCAAAAGGAATCTACCCTCCACTTGGTGTTGCG 24814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786029705317200