Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1681 93.3 1e-13 >seq1681 Length=28542 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || |||||||| |||||||| ||||| |||||| | || Sbjct 24456 AAAACACTCACGGGCAAAACGATAACTTTGGAGGTGGAGCCGAGTGACACGATTGAGAAT 24397 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || |||||||||||| || || || | || || ||| Sbjct 24396 GTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCACCAGATCAGCAGCGTCTCATATTC 24337 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||| || | || | | || ||||| | |||||||| ||| Sbjct 24336 GCTGGTAAGCAACTGGAAGACGGTCGTACACTTTCGGACTACAATATTCAGAAAGAATCT 24277 Query 206365 ACTCTTCACCTTGT 206378 |||||||| ||||| Sbjct 24276 ACTCTTCATCTTGT 24263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181610173681110