Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1681 86.0 6e-12 >seq1681 Length=28542 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 35612 CGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC 35671 |||||||| || | |||| | |||||||||| |||||| |||| | | | | | Sbjct 24676 CGCTGCTGATCTGGTGGAATTCCCTCCTTGTCCTGGATCTTCGCTTTCACATTCTCAATC 24735 Query 35672 GTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATC 35731 ||||| |||| |||||||||| || |||||||| ||||| | ||||||||||| || Sbjct 24736 GTGTCACTCGGCTCCACCTCCAAAGTTATCGTTTTGCCCGTGAGTGTTTTCACAAAGATT 24795 Query 35732 TGCAT 35736 ||||| Sbjct 24796 TGCAT 24800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450715218262800