Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1681 98.7 8e-16 >seq1681 Length=28542 Score = 98.7 bits (108), Expect = 8e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| ||||| |||||||||||||| | | || | || ||||||| || || ||||| Sbjct 24275 GTAGATTCTTTCTGAATATTGTAGTC-CGAAAGTGTACGACCGTCTTCCAGTTGCTTACC 24333 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | ||||||||||| ||||| || || | || ||||| || |||||| || Sbjct 24334 AGCGAATATGAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGGATCTTCGCCTT 24393 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | || | ||||| | | || || || | |||||| | ||||||||| || || Sbjct 24394 CACATTCTCAATCGTGTCACTCGGCTCCACCTCCAAAGTTATCGTTTTGCCCGTGAGTGT 24453 Query 27230 TTTCAC 27235 |||||| Sbjct 24454 TTTCAC 24459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424862361667920