Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2517 84.2 7e-11 >seq2517 Length=16602 Score = 84.2 bits (92), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 443697 AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGC 443756 |||| || ||||| | ||||| || |||| || ||||| | || || || | Sbjct 11890 AGCTACGCAGAGCGTGTTGTCGCCTTCGCTGCTGTTGAAGGTGTCTTCTTCTCTGGTT-C 11948 Query 443757 TTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAA 443816 || || || ||||| ||| | || |||||||| || |||| |||||| || || ||||| Sbjct 11949 ATTCGCGTCAATCTTTTGGCTTAAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCAGTAA 12008 Query 443817 CGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAA 443876 || |||| || || || ||||||||||| || |||||||| | ||| ||| Sbjct 12009 TGAGTTGATTAGCCGAGATGAGGGTTTGCACACTGATTTCGCCTGCTTGATCT---TCAA 12065 Query 443877 ACACATCGT 443885 ||||||||| Sbjct 12066 ACACATCGT 12074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588052923779950