Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 1e-15 >seq66 Length=170536 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 63740 CTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTG 63799 |||| | |||| || | ||||| |||||||| || | | ||| || ||||| || | Sbjct 159707 CTAAGACACCACAAGTGGGTGACAAATTTGCCTCCCGTCACGGTCAGAAGGGTACTTGCG 159766 Query 63800 GTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCG 63859 |||| | ||||| ||||| || ||||| || ||| || |||||| || ||| | Sbjct 159767 GTATCCTGTATCGTCAAGAGGACATGCCCTTCACCTGTGAAGGTATCACCCCAGATATTA 159826 Query 63860 TCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 | |||||||| |||||| |||||||||||||||| || Sbjct 159827 TTATCAATCCTCACGCTATTCCCAGTCGTATGACTGT 159863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666959212299600