Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq782 84.2 1e-11 >seq782 Length=7673820 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 2213966 GGATCGAACCCCCGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTA 2214020 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| | ||||||||||||||||||||||||||| ||||||||||||| || Sbjct 5762156 GGATCGAACCCCCCACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTATCCGG 5762215 Query 11528 CCG 11530 ||| Sbjct 5762216 CCG 5762218 Lambda K H 0.641 0.410 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261479590035868