Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3456 91.5 1e-13 >seq3456 Length=47684 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| ||||| || ||||| ||||| |||| ||| | || Sbjct 38983 ATGCAAATTTTTGTGAAAACCCTCACTGGCAAAACAATTACACTCGAGGTTGAGCCGAGT 38924 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || || ||| ||||| || ||| ||||| ||||| Sbjct 38923 GATACGATTGAGAACGTGAAGTCGAAGATTCAGGATAAGGAGGGCATCCCCCCAGATCAA 38864 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| |||| |||| ||| || || || ||||||| | || | | ||||| || Sbjct 38863 CAACGACTCATTTTTGCTGGTAAGCAGCTAGAAGAAGGTCGTACGCTTTCTGATTACAAT 38804 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 || ||||| ||||| ||| ||||| | ||| Sbjct 38803 ATCCAAAAGGAGTCGACTCTACATCTTGTG 38774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425325115125160