Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq777 185 7e-41 seq780 143 2e-28 seq2226 118 9e-21 seq1091 116 3e-20 seq3456 114 1e-19 seq762 102 7e-16 >seq777 Length=22338478 Score = 185 bits (204), Expect = 7e-41 Identities = 370/546 (68%), Gaps = 2/546 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||| | || ||||| | | |||||| ||| | | ||| | || ||| Sbjct 20630164 GCTGTCGGTATTGATCTTGGTACCACTTTTTCTTGTGTCGGTATATTCCAACACGGAAAA 20630105 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||||| || ||||| || || || | ||||| || ||||||| ||||| Sbjct 20630104 GTCGAAATTATAGCTAATGACCAGGGCAATCGCACTACCCCTAGTTATGTTGGCTTCACA 20630045 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | || | |||||||| || || | |||| || || |||||||| Sbjct 20630044 GACACCGAGCGGTTGATCGGTGATGCTGCCAAGAACCAAGTGGCTATGAACCCTACCAAC 20629985 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || ||||| || ||| | ||||| | | || ||||| ||| |||| Sbjct 20629984 ACCGTGTTCGATGCCAAGCGTCTCATTGGTCGTCGATTCGATGATAGCGTTGTGCAGGGG 20629925 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||||||||||||||| | || |||||| || ||||| | || || | | Sbjct 20629924 GATATGAAGCATTGGCCTTTCCATGTGGTCAATGTTGGAGGCAAACCGAAGATCGAGGTT 20629865 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | | ||| || || | ||||| | || || || ||||| || || Sbjct 20629864 GAGTACAAGGGAGAGAAGAAGTCCTTCTTTGCAGAAGAGATCTCCTCCATGGTGTTGCTG 20629805 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAAC 550410 || ||||| | ||||| |||| |||| ||||| || | ||||| || || || Sbjct 20629804 AAGATGAAGGAGACAGCTGAGGCTTACCTTGG-CAAGACTGTGAAAGATGCTGTCATTAC 20629746 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| ||||| || || |||||| || ||||| || || || ||||||||| ||| | Sbjct 20629745 TGTGCCAGCCTACTTCAATGACAGCCAGCGTCAGGCCACAAAGGATGCTGGAGTGATTTC 20629686 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||| | || |||||||| || ||||| || || ||||| ||||| | || || ||| | Sbjct 20629685 TGGCTTGAACGTTCTTCGAATCATCAACGAGCCCACTGCGGCTGCCATCGCGTACGGATT 20629626 Query 550531 TGATAA 550536 || || Sbjct 20629625 GGACAA 20629620 Score = 174 bits (192), Expect = 1e-37 Identities = 372/550 (68%), Gaps = 8/550 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| || || ||||| || | || |||||||| | ||| |||| || Sbjct 20604798 AGCTGTTGGTATCGACTTGGGAACGACCTTCTCATGCGTTGGTGTGTTTCAACATGGCAA 20604739 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||| ||||| ||||||||||| || | || |||||| |||||| | ||||| Sbjct 20604738 GGTTGAAATAATTGCTAATGATCAAGGCAATCGCACAACTCCAAGTTATGTCGCCTTCAC 20604679 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTAC 550167 || || || | ||| |||| ||||| || || | |||| ||| || || || || Sbjct 20604678 AGACACCGAGCGTTTGATTGGCGATGCTGCCAAGAACCAAGTAGCCA-TG--AACCCAAC 20604622 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 || || | || ||||| |||||| | ||||| | | | | || ||||||| || Sbjct 20604621 GAACACCGTGTTCGATGCCAAACGTCTTATTGGTCGCAAGTATGCGGAAGCGACTGTACA 20604562 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 || ||||||||||||||||||||||| | | || || || ||||| | || || Sbjct 20604561 AGCTGATATGAAGCATTGGCCTTTCCATGTGGCCGATTTTGGAGGCAAACCGAAGATAGA 20604502 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | | | ||| || || | || ||| | || || || ||||| || Sbjct 20604501 GGTTGTGTACAAGGGAGAGAAGAAGTCCTTCTTTCCTGAAGAGATCTCCTCCATGGTGTT 20604442 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAA 550406 |||| ||||| | ||||| |||| |||| ||||| || |||| || | Sbjct 20604441 GCTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGG-CAAGACTGTGGAAAATGCTGTCA 20604383 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||||||||| || || |||||| || ||||| || || || |||||||| || Sbjct 20604382 TTACTGTACCAGCCTACTTCAATGACAGCCAGCGTCAGGCCACAAAGGATGCTGGTGCTA 20604323 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | | || | |||||||| || || || ||||| || ||||| ||||| | || || | Sbjct 20604322 TATCGGGTATGAATGTTCTCCGAATAATTAATGAGCCCACTGCGGCTGCCATCGCGTACG 20604263 Query 550527 GACTTGATAA 550536 || | || || Sbjct 20604262 GATTGGACAA 20604253 Score = 174 bits (192), Expect = 1e-37 Identities = 370/550 (67%), Gaps = 2/550 (0%) Strand=Plus/Minus Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGG 550047 ||| ||| | ||||| ||| | || || || | |||||||||||| | ||| | || Sbjct 20650106 AGTCGCTGTTGGTATTGATCTTGGTACTACTTTCTCTTGTGTTGGTGTATTTCAACACGG 20650047 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 ||||| |||||||| || ||||| || || || | ||||| || ||||||| || Sbjct 20650046 GAAAGTCGAAATTATAGCTAATGACCAGGGCAATCGCACTACCCCTAGTTATGTTGGCTT 20649987 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 ||| || || || | || | |||||||| || || | |||| || || ||||| Sbjct 20649986 CACAGACACCGAGCGGTTGATCGGTGATGCTGCCAAGAACCAAGTGGCTATGAACCCTAC 20649927 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| || | || ||||| || ||| | ||||| | | || ||||| ||| || Sbjct 20649926 CAACACCGTGTTCGATGCCAAGCGTCTCATTGGTCGTCGATTCGATGATAGCGTTGTGCA 20649867 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 || ||||||||||||||||||||||| | || |||||| || ||||| | || || Sbjct 20649866 GGGGGATATGAAGCATTGGCCTTTCCATGTGGTCAATGTTGGAGGCAAACCGAAGATCGA 20649807 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | | | ||| || || | ||||| | || || || ||||| || Sbjct 20649806 GGTTGAGTACAAGGGAGAGAAGAAGTCCTTCTATGCAGAAGAGATCTCCTCCATGGTGTT 20649747 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAA 550406 |||| ||||| | ||||| |||| |||| ||||| || |||| || | Sbjct 20649746 GCTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGG-CAAGACTGTGGAAAATGCTGTCA 20649688 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||||||||| || || |||||| || ||||| || || || |||||||| || Sbjct 20649687 TTACTGTACCAGCCTACTTCAATGACAGCCAGCGTCAGGCCACAAAGGATGCTGGTGCTA 20649628 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | | || | |||||||| || || || ||||| || ||||| ||||| | || || | Sbjct 20649627 TATCGGGTATGAATGTTCTCCGAATAATTAATGAGCCCACTGCGGCTGCCATCGCGTACG 20649568 Query 550527 GACTTGATAA 550536 || | || || Sbjct 20649567 GATTGGACAA 20649558 Score = 134 bits (148), Expect = 1e-25 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||||| |||| || || ||||| || || ||||| ||||| ||||| |||||||||| Sbjct 18169349 AAGTTAATAATGCCGTCATTACTGTCCCTGCGTATTTCAATGATTCACAGCGTCAAGCTA 18169290 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | ||||||||||| | || |||||||| || |||||||| | |||||||| ||||| | Sbjct 18169289 CCAAAGATGCTGGTCAAATCGCTGGACTAAACGTTCTTCGCGTCATCAATGAGCCTACAG 18169230 Query 550509 CTGCTGCACTTGCATATGG 550527 ||||||| ||||| ||||| Sbjct 18169229 CTGCTGCTCTTGCTTATGG 18169211 Score = 107 bits (118), Expect = 2e-17 Identities = 207/303 (68%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 552297 CTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAAT 552356 ||| | ||||| |||||||| ||||| || | ||||| | || || | | ||||| Sbjct 18168487 CTTCTTGATGTCACTCCTCTTTCTCTCGGCATTGAAACCCTCGGCGGCGTGTTCACTAAA 18168428 Query 552357 CTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCA 552416 ||||| | |||| || ||||| || |||||||||| || || || ||| | Sbjct 18168427 CTTATTAACCGAAACACAACTATCCCAACCAAAAAATCTCAAGTGTTCTCCACGGCCGCC 18168368 Query 552417 GATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGA-GAAAGAAAATTCACTAAAGA 552475 ||| ||||||| | | || | ||||| | || ||| ||| | | | | | || Sbjct 18168367 GATGGTCAAACT-CAGGTAGAGATCAAAGTATTCCAGGGCGAACGTGAGATGGCCATTGA 18168309 Query 552476 TAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACC 552535 ||| || | ||||| || | | | ||||| || || || |||||||| ||||| Sbjct 18168308 TAACAAACTTCTTGGCCGCTTCTCTCTTGTTGGTATCCCACCAGCCCCTCGTGGTGTACC 18168249 Query 552536 GCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGA 552595 |||||||||||||| || |||||||| ||||| || ||| | || || ||||| | || Sbjct 18168248 ACAAATTGAAGTTACCTTTGATATCGACGCCAACGGTATTGTCAACGTTTCTGCTAGAGA 18168189 Query 552596 TAA 552598 ||| Sbjct 18168188 TAA 18168186 >seq780 Length=14665888 Score = 143 bits (158), Expect = 2e-28 Identities = 344/517 (67%), Gaps = 9/517 (2%) Strand=Plus/Plus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||| ||||||| ||||||| |||||||||||| || || ||||| ||||| | | Sbjct 8004623 GTGTCGGTGTTTTCAAAAATGGACGAGTTGAAATTATCGCAAACGATCAGGGTAATCGTA 8004682 Query 550086 CTACTCCATCTTATGTTTCTTTCACGGAAACTG---AACATTTAGTTGGTGATGCAGCAA 550142 || || || || || |||| || | | || ||| | || ||||||| || || | Sbjct 8004683 TCACACCGTCGTACGTCGCTTTTACAAATAATGGTGAACGTCTAATTGGTGACGCTGCGA 8004742 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 | | ||| || ||||||| |||||| |||| ||||| || ||| | || || Sbjct 8004743 AGAACCAACTGACATCGAATCCTAAAAATACTCTTTTCGATGCAAAGCGTCTTATCGGTC 8004802 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | | ||| ||||| | ||| || | ||||| || | | |||||| || || | | Sbjct 8004803 GCACCTTTGATGATAAGGATGTGCAAGAGGATATAAAACGATATCCTTTCAAAGTTATCA 8004862 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGG--ATCTGTTAAACA-ATTTT 550319 | | ||||| | || |||| | || | || | | | || | ||| Sbjct 8004863 ACAAGGCCAACAAACCACACATGGAAGTT---CAAGTTGGTGACGAGGTCAAGACATTCG 8004919 Query 550320 CACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTG 550379 | || ||| || | ||| | ||||||||| || ||||| | | || || | | Sbjct 8004920 CTCCTGAAGAAGTCTCAGCCATGGTTTTAGGCAAGATGAAGGAGATTGCTGAGGCCTATC 8004979 Query 550380 TTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||||| ||||| |||||||| | ||||||||||| || || ||||| |||||| Sbjct 8004980 TTGGTACTCCGGTTACCCATGCAGTAGTTACTGTACCAGCTTACTTCAATGATGCACAAC 8005039 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 ||||||| || ||||| || || ||||| || | | ||| || ||||| ||||||| Sbjct 8005040 GTCAAGCAACCAAAGACGCAGGTGCCATTGCAGGTTTAACTGTCCTCCGTATCATCAATG 8005099 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||| ||||| || || |||| || ||| | ||||| Sbjct 8005100 AACCAACTGCCGCAGCTATTGCCTACGGATTGGATAA 8005136 Score = 140 bits (154), Expect = 3e-27 Identities = 323/479 (67%), Gaps = 12/479 (3%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAG 552172 ||||| ||||| | || ||||| || || |||||||| || ||| ||| | || || Sbjct 8005567 CATGATATTGTCTTGGTCGGTGGTTCAACTAGAATTCCAAAGGTTCAAGAACTCGTCAAA 8005626 Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232 || ||||||||| ||| | |||| | || | || || ||||||||||||||||| Sbjct 8005627 GAATT-TTTCAATGGCAAAGAGTTAAGCAGAGGTATCAACCCTGATGAGGCTGTTGCCTA 8005685 Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA-AAACTACAAAATA 552291 |||||| || | ||||| | | | || ||| ||||||| | ||| ||| Sbjct 8005686 TGGTGCTGCTGTGCAAGCTGGTGTCATTAGTGG------TGATGAAGATACT-GGTGATA 8005738 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | || || | |||||| || || || | ||| | || || ||||| ||| |||||| Sbjct 8005739 TCGTTCTACTTGATGTTTGCCCACTTACTATGGGTATTGAGACTGTTGGTGGTGTTATGA 8005798 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGT 552411 | || || || ||| || || |||||| || || |||| || || ||||| Sbjct 8005799 CAAAACTCATTCCTAGGAACACCGTCATTCCTACAAAGAAGTCTCAAGTCTTCTCTACTG 8005858 Query 552412 ATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTA 552471 | | ||| | ||| | ||||||| || || | |||||||| || | | || | Sbjct 8005859 CTGCTGATGACCAACCCACTGTTACCATACAGGTCTTTGAAGGTGAGCGTCCCATGACCA 8005918 Query 552472 AAGATAATAATCAACTT-GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 ||||||| | | ||| |||| || || | || |||||||| |||||||| || Sbjct 8005919 AAGATAACCA-CTTCTTGGGTAAATTCGATCTCACCGGCATTCCTCCGGCTCCTCGCGGT 8005977 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 | || ||||| || ||||||||||| || |||| || || ||| | || ||| |||| Sbjct 8005978 ATCCCACAAATCGAGGTTACTTTCGAAATTGATGTGAACGGCATTCTCAAAGTGTCTGC 8006036 >seq2226 Length=3144 Score = 118 bits (130), Expect = 9e-21 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||||| ||||| || | |||||||||||| | ||| |||| || Sbjct 2865 GCTGTTGGTATCGATTTGGGAACGACCTTCTCTTGTGTTGGTGTGTTCCAACATGGCAAG 2924 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||||| || ||||| || || || | ||||| || ||||||| ||||| Sbjct 2925 GTGGAAATTATAGCTAATGACCAGGGCAATCGCACTACCCCCAGTTATGTTGGCTTCACA 2984 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | || | |||||||| || || | |||| || || |||||||| Sbjct 2985 GACACCGAGCGGTTGATCGGTGATGCTGCCAAGAACCAAGTGGCTATGAACCCTACCAAC 3044 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || ||||| || ||| | ||||| | | || ||||| ||| |||| Sbjct 3045 ACCGTGTTCGATGCCAAGCGTCTCATTGGTCGTCGATTCGATGATAGCGTTGTGCAGGGG 3104 Query 550232 GATATGAAGCATTGGCCT 550249 |||||||||||||||||| Sbjct 3105 GATATGAAGCATTGGCCT 3122 >seq1091 Length=18644 Score = 116 bits (128), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| | ||| | ||||| || ||| ||||| || ||||| |||| || || | Sbjct 1483 AGACGCAATACCAAGTGAAGTGTGGACTCCTTTTGG--ATGTTGTAGTCAGAGAGGGTAC 1426 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||||||||| || || ||||| ||||| | ||| || || || ||||| |||| Sbjct 1425 GACCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCTT 1366 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | || |||||||| || ||||| ||| || ||||| || | | |||||||| Sbjct 1365 CCTTGTCTTGAATCTTAGCCTTTACATTCTCGATGGTATCGCTGGGCTCAACTTCGAGAG 1306 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||| || ||||| || || ||||| ||||| Sbjct 1305 TAATAGTTTTACCGGTGAGAGTCTTCACAAAAATCTGCAT 1266 Score = 98.7 bits (108), Expect = 8e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || || || |||||||| || ||| ||| ||||| || ||||| |||| ||||| | Sbjct 1711 AGGCGAAGCACAAGATGTAGAGTAGATTCCTTTTGG--ATGTTGTAGTCAGAGAGAGTAC 1654 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||||||||| || || ||||| ||||| | || || || || ||||| |||| Sbjct 1653 GACCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCTT 1594 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | || |||||||| || || || |||||| ||||| || | ||| || | Sbjct 1593 CCTTGTCTTGAATCTTAGCCTTCACATTCTCAATGGTATCGCTGGGCTCGACTTCAAGTG 1534 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || || || ||||| ||||| || || ||||| Sbjct 1533 TAATGGTCTTTCCTGTGAGAGTCTTAACAAAGATCTGCAT 1494 >seq3456 Length=47684 Score = 114 bits (126), Expect = 1e-19 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| || |||||||| || || ||| ||||| ||||||||||||| || || | Sbjct 38766 AGACGAAGCACAAGATGTAGAGTCGACTCCTTTTGG--ATATTGTAATCAGAAAGCGTAC 38823 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||| || || || || |||||||| |||| ||| ||||| || || || || | Sbjct 38824 GACCTTCTTCTAGCTGCTTACCAGCAAAAATGAGTCGTTGTTGATCTGGGGGGATGCCCT 38883 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | ||||| ||||| || || || |||||| |||||| | | | ||||| | Sbjct 38884 CCTTATCCTGAATCTTCGACTTCACGTTCTCAATCGTATCACTCGGCTCAACCTCGAGTG 38943 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| ||||| ||||| || ||||| || |||||||||||| Sbjct 38944 TAATTGTTTTGCCAGTGAGGGTTTTCACAAAAATTTGCATA 38984 >seq762 Length=501 Score = 102 bits (112), Expect = 7e-16 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTAC 551953 |||| ||||||| |||||||||| ||||| ||||| || || | || || | | Sbjct 345 AGCTATTCGTCGATTAAGAACTGCGTGCGAGAGAGCAAAGAGAACCCTCAGTTCAAGCTC 286 Query 551954 TCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTC 552013 ||| | | |||||| | ||||| || || | |||||||||| | || | ||| | Sbjct 285 TCAGGCAAATATTGAGATTGATTCGTTGTTGAATGGAATTGATTTCTACACCACCATTAC 226 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 |||| ||| || || ||||| |||||| || |||| || |||||||||| || Sbjct 225 TCGGGCTCGATTCGAGGAACTTTGTGGTGATCTATTCAGAAGCACTCTTGAACCAGTTGA 166 Query 552074 ACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGG 552133 | | | || | ||| | ||||| || ||| | ||| ||||||||||| | ||||| Sbjct 165 GAAGGCTCTACGTGATGCTAAGATGGACAAAAGCTCAGTTCATGAAATTGTATTAGTTGG 106 Query 552134 TGGATCTACAAGAATTCCTAA 552154 || || || | ||||| || Sbjct 105 AGGTTCAACTCGTATTCCGAA 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029103341730070