Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq781 134 2e-25 >seq781 Length=13122981 Score = 134 bits (148), Expect = 2e-25 Identities = 176/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485467 CGTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGC 1485526 || |||||||||| || || || || || ||||| || |||||| |||||| || ||| Sbjct 3275369 CGGTGTACTTGGTCACAGCTTTAGTGCCTTCTGACACTGCGTGCTTGGCCAACTCACCGG 3275428 Query 1485527 GCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAG 1485586 ||| || ||| ||||| || ||||| |||||||| | ||| ||| ||||||| Sbjct 3275429 GCAAGAGCAGACGCACTGCTGTCTGAATCTCGCGACTTGTGATGGTGGACTTCTTGTTAT 3275488 Query 1485587 TGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | |||||| || | | ||||| | || || |||| ||||| || || || |||| Sbjct 3275489 AGTGCGCCAATCGACTCGACTCGGCAGCAATACGCTCGAAGATGTCATTCACGAAAGAGT 3275548 Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706 ||||||| ||||| | || ||||||||| |||||| || ||||| ||||||| Sbjct 3275549 TCATGATGGACATGGCCTTCGAGGAGATGCCAGTGTCGGGATGAACCTGACGCAGCACCT 3275608 Query 1485707 TGTA 1485710 |||| Sbjct 3275609 TGTA 3275612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915858877474277