Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq781 109 8e-18 >seq781 Length=13122981 Score = 109 bits (120), Expect = 8e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| ||||| || ||| || ||| |||| ||| ||| || Sbjct 3275615 ATCTACAAGGTGCTGCGTCAGGTTCATCCCGACAC---TGG--CATC-TCCTCGAAGGCC 3275562 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || || || ||||| |||| || || | ||||| | || Sbjct 3275561 ATGTCCATCATGAACTCTTTCGTGAATGACATCTTCGAGCGTATTGCTGCCGAGTCGAGT 3275502 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||||| || |||||| ||| ||| | |||||||| ||||| || ||| Sbjct 3275501 CGATTGGCGCACTATAACAAGAAGTCCACCATCACAAGTCGCGAGATTCAGACAGCAGTG 3275442 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || ||| || ||| ||| || |||||| |||||| || || || ||||| Sbjct 3275441 CGTCTGCTCTTGCCCGGTGAGTTGGCCAAGCACGCAGTGTCAGAAGGCAC 3275392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177459825954166