Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq780 284 4e-71 seq777 279 2e-69 seq1091 188 2e-42 seq778 176 1e-38 seq3456 168 2e-36 seq762 141 3e-28 seq781 89.7 2e-12 seq783 84.2 7e-11 >seq780 Length=14665888 Score = 284 bits (314), Expect = 4e-71 Identities = 873/1330 (66%), Gaps = 45/1330 (3%) Strand=Plus/Plus Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292 |||| | ||||| |||||| || || ||||| || ||||| ||||| ||||| | | Sbjct 8004623 GTGTCGGTGTTTTCAAAAATGGACGAGTTGAAATTATCGCAAACGATCAGGGTAATCGTA 8004682 Query 349293 CAACGCCATCATACGTTGCATTTACCGAAACTG---AGCGTATGATTGGTGATTCTGCAA 349349 || || || ||||| || ||||| | | || | ||| | |||||||| |||| | Sbjct 8004683 TCACACCGTCGTACGTCGCTTTTACAAATAATGGTGAACGTCTAATTGGTGACGCTGCGA 8004742 Query 349350 AAAATCAAGCTG-CTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 | || ||| ||| | | ||||| |||||||| |||| ||||| ||||| ||||| ||| Sbjct 8004743 AGAACCAA-CTGACATCGAATCCTAAAAATACTCTTTTCGATGCAAAGCGTCTTATCGGT 8004801 Query 349409 AGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTT 349468 | | ||| ||| || | ||| ||| |||||| | |||||| | ||| | Sbjct 8004802 CGCACCTTTGATGATAAGGATGTGCAAGAGGATATAAAACGATATCCTTTCAAAGTTAT- 8004860 Query 349469 CCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACA----AAAACA 349524 ||| | | | | |||||| || || ||| || | ||||| | || ||| Sbjct 8004861 -CAACA-AGGCCAACAAACCACACATGGAAGTTCAAGTT---GGTGACGAGGTCAAGACA 8004915 Query 349525 ATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGC 349584 | | || |||||| | ||| | |||||||||| || |||||||| |||||||| || Sbjct 8004916 TTCGCT-CCTGAAGAAGTCTCAGCCATGGTTTTAGGCAAGATGAAGGAGATTGCTGAGGC 8004974 Query 349585 ATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGC 349644 ||| | ||| | || || |||| || ||||||||||||| || || |||||||| Sbjct 8004975 CTATCTTGGTACTCCGGTTACCCATGCAGTAGTTACTGTACCAGCTTACTTCAATGATGC 8005034 Query 349645 CCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGAT 349704 || ||| ||||| ||||| || || |||||| || |||| ||| || | || || Sbjct 8005035 ACAACGTCAAGCAACCAAAGACGCAGGTGCCATTGCAGGTTTAACTGTCCTCCGTATCAT 8005094 Query 349705 TAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaa 349764 |||||||| ||||| ||||| ||||| || || | ||||| | || || | ||||| Sbjct 8005095 CAATGAACCAACTGCCGCAGCTATTGCCTACGGATTGGATAAGA-AAGAGAGC--GAAAA 8005151 Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 || || ||| |||||||||| ||||||||||| || ||||| || || | ||| | || Sbjct 8005152 GAACATCCTTGTTTTTGATTTGGGTGGTGGTACCTTCGATGTCTCCCTCTTGACAATCGA 8005211 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 | || | ||||| || |||||| ||| ||||| ||||| ||||| ||||| || Sbjct 8005212 TAACGGTGTATTTGAGGTCGTGGCAACTAGTGGGGATACCCATCTCGGTGGTGAAGACTT 8005271 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATAT 349944 ||| | || | || | |||| ||| | ||| | | | ||||| Sbjct 8005272 CGATCAACGCTTGATTGATTACTTTGCTAAGTTGTACAAGAAGAAGGAGGGCAAGGATAT 8005331 Query 349945 --TG-GAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 || |||| ||| | || | | || ||| || ||| |||||||| Sbjct 8005332 CATGAAAGAT-GTCC--GTGCTGTCCAAAAGCTTAGACGTGAAGTTGAGAAGGCTAAGCG 8005388 Query 350002 T-TCCTTATCATCTACTACCCAAACCTCT---ATTGAAATTGATTCTCTTGCTGATGGCA 350057 | ||||| |||| || | | || |||||||||||| || |||||| | Sbjct 8005389 TACCCTTA----GTACTGAGCACAGCACTGTCATTGAAATTGATAGCTTTTTTGATGGTA 8005444 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 | || |||| | | || |||| | || || ||||||||| | | ||||| || | Sbjct 8005445 AGGACTTCTCTGAAACTCTTACGAGAGCCCGATTTGAAGAACTCAACAATGATCTCTTCA 8005504 Query 350118 GAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG- 350176 || || | | || || ||||| || | || || | | | ||||| | || Sbjct 8005505 GAAGCACTCTCAAACCCGTCGAAAATGTTATGAAGGACTCGGATCT---CAAAATTGAGG 8005561 Query 350177 --ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTAC 350234 ||| |||| | || || || |||||||| || | |||||||| |||||| | | Sbjct 8005562 ATATTCATGATATTGTCTTGGTCGGTGGTTCAACTAGAATTCCAAAGGTTCAAGAACTCG 8005621 Query 350235 TATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTG 350294 | || ||||| ||||||||||| ||| || || || ||||| ||||||| Sbjct 8005622 TCAAAGAATTTTTCAATGGCAAAGAGTTAAGCAGAGGTATCAACCCTGATGAGGCTGTTG 8005681 Query 350295 CATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATG 350354 | |||||||||||||| || || | | | ||| || | || | | || || Sbjct 8005682 CCTATGGTGCTGCTGTGCAAGCTGGTGTCATTAGTGGTGATGA-AG-----ATACTGGTG 8005735 Query 350355 ATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAA 350414 || | | ||||| ||||| |||||| | | || | || ||| ||||| || | Sbjct 8005736 ATATCGTTCTACTTGATGTTTGCCCACTTACTATGGGTATTGAGACTGTTGGTGGTGTTA 8005795 Query 350415 TGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTA 350474 |||| || |||||||| || | | |||||||| ||||| ||| || |||| Sbjct 8005796 TGACAAAACTCATTCCTAGGAACACCGTCATTCCTACAAAGAAGTCTCAAGTCTTCTCTA 8005855 Query 350475 CATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCA 350534 | ||| ||| | || || | || || || || || ||||||||||| ||| | | Sbjct 8005856 CTGCTGCTGATGACCAACCCACTGTTACCATACAGGTCTTTGAAGGTGAGCGTCCCATGA 8005915 Query 350535 CTAAAGATAA 350544 | |||||||| Sbjct 8005916 CCAAAGATAA 8005925 Score = 132 bits (146), Expect = 1e-25 Identities = 205/291 (70%), Gaps = 4/291 (1%) Strand=Plus/Minus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 ||||||| ||||| |||||||| |||||||| ||||| ||||| || | ||| | Sbjct 8005705 CAGCTTGCACAGCAGCACCATAGGCAACAGCCTCATCAGGGTTGATACCTCTGCTTAACT 8005646 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 |||||||||| ||||||||| | | || ||||| |||||||||||||||||||||| Sbjct 8005645 CTTTGCCATTGAAAAATTCTTTGACGAGTTCTTGAACCTTTGGAATTCTAGTTGAACCAC 8005586 Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427 |||| || || | |||| |||| | ||| | | | || || || | ||| || Sbjct 8005585 CGACCAAGACAATATCATGAATATCCTCAATTT--TGAGATCCGAGTCCTTCATAACATT 8005528 Query 183428 TTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCT 183487 ||| || || | | ||| |||| || | ||| | | ||||| |||| ||||| Sbjct 8005527 TTCGACGGGTTTGAGAGTGCTTCTGAAGAGATCATTGTTGAGTTCTTCAAATCGGGCTCT 8005468 Query 183488 AGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAAT 183538 || | || | | | ||||| |||||| | | ||| |||||||||||| Sbjct 8005467 CGTAAGAGTTTCAGAGAAGTCCTTACCATCAAAAAAGCTATCAATTTCAAT 8005417 >seq777 Length=22338478 Score = 279 bits (308), Expect = 2e-69 Identities = 953/1476 (65%), Gaps = 17/1476 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || ||||| || || || || | || || |||| ||| | ||| ||| Sbjct 20604797 GCTGTTGGTATCGACTTGGGAACGACCTTCTCATGCGTTGGTGTGTTTCAACATGGCAAG 20604738 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||||||||| ||||||||||| || | ||||| ||| || || || || || Sbjct 20604737 GTTGAAATAATTGCTAATGATCAAGGCAATCGCACAACTCCAAGTTATGTCGCCTTCACA 20604678 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||| ||| |||| || || |||| || || |||| || Sbjct 20604677 GACACCGAGCGTTTGATTGGCGATGCTGCCAAGAACCAAGTAGCCATGAACCCAACGAAC 20604618 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || ||||| || || ||||||||| | | | | | || || |||| || Sbjct 20604617 ACCGTGTTCGATGCCAAACGTCTTATTGGTCGCAAGTATGCGGAAGCGACTGTACAAGCT 20604558 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || |||| ||||| ||| | | | || | ||||| | || ||| Sbjct 20604557 GATATGAAGCATTGGCCTTTCCATGTGG---CCGATTTTGGAGGCAAACCGAAGATAGAG 20604501 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 |||| || || || || | || || || || ||||| || || || ||||| || Sbjct 20604500 GTTGTGTACAAGGGAGAGAAGAAGTCCTTCTTTCCTGAAGAGATCTCCTCCATGGTGTTG 20604441 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 | || |||||||| | ||||| || || | || | || || ||||||| ||| Sbjct 20604440 CTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGGCAAGACTGTGGAAAATGCTGTCATT 20604381 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 |||||||||||||| || ||||| ||||||| || ||||| |||||||| || Sbjct 20604380 ACTGTACCAGCCTACTTCAATGACAGCCAGCGTCAGGCCACAAAGGATGCTGGTGCTATA 20604321 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 |||| | |||||||| |||| |||||||| |||||||| || || || || || || Sbjct 20604320 TCGGGTATGAATGTTCTCCGAATAATTAATGAGCCCACTGCGGCTGCCATCGCGTACGGA 20604261 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 | || || | | | | ||| || | | || || ||||| |||||||| ||| Sbjct 20604260 TTGGACAAGAAGGTGGGCTCTGAACGCAACGTGTTGATCTTCGATTTGGGTGGTGGCACT 20604201 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || | || | |||| || || | || || || || |||||||||| Sbjct 20604200 TTCGATGTCTCCGTTCTCTCCATTGAGGACGGCGTCTTCGAGGTGAAGTCAACTGCTGGC 20604141 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || ||||| | ||||| || || || || ||| | || || ||||| | || Sbjct 20604140 GACACACACTTGGGTGGTGAGGACTTCGACTCTCGAATGGTGAACCACTTTGTGGAGGAG 20604081 Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 || ||||| || ||| | || | | || ||||| || ||||| | ||| Sbjct 20604080 TTCAAGCGCAAATATAAGAAGGACTTGACAACCAACAAGAGAGCCATTCGTCGATTGAGA 20604021 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 || || ||||| | || ||| | | | || | | ||||| | ||| || | Sbjct 20604020 ACCGCATGTGAGAGAGCAAAGAGAACACTGAGTTCCAGTGCCCAAGCAAATATAGAGGTC 20603961 Query 350039 GATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGA 350097 || || ||| | || || || |||| |||| || || |||||||| || || || Sbjct 20603960 GACTC-GTTGATGGACGGTGTTGACTTCTACACATCCATAACTCGTGCTCGATTCGAGGA 20603902 Query 350098 ATTATGTATGGATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156 || ||| ||||| || | ||| ||| |||| || ||||| || | | |||| Sbjct 20603901 GTTGTGTGCTGATCTCTTCCGTAGC-ACATTGGAGCCAGTGGAGAAGGCGCTTCGTGATG 20603843 Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216 | || || ||| | | | | || || || || |||||||| || || ||||||| Sbjct 20603842 CGAAGTTGGACAAGAGCTCGGTGCACGATGTGGTGTTGGTTGGTGGATCGACTCGTATTC 20603783 Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA--TCAAT 350274 | || || || |||| | || || || || || || || | | || || Sbjct 20603782 CGAAGGTGCAGAAGTTGTTGCAGGACTTCTTCAACGGTCGTGA--GTTGAACAAGTCCAT 20603725 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 ||||| || || ||||| || || ||||| ||||| ||||| | ||||| || || | Sbjct 20603724 CAATCCGGACGAGGCTGTGGCCTACGGTGCAGCTGTGCAGGCGGCCATTTTGTCAGGTGA 20603665 Query 350335 TAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 ||| || | | | | ||||| | || || |||||| | ||| | || ||||| Sbjct 20603664 CAAG---TCGGAGGCAGTACAGGATCTGCTTCTCCTGGATGTAGCACCATTGTCTCTTGG 20603608 Query 350392 ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTAC 350451 | || ||| |||||| || ||||| | ||| || | |||| || | || || Sbjct 20603607 TCTGGAGACTGCTGGTGGTGTGATGACGGCTCTCATCAAACGCAATACAACCATCCCAAC 20603548 Query 350452 AAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 || || | ||||| || | || | |||| || ||||| | || ||||| || Sbjct 20603547 CAAGCAGACACAAACCTTCACCACGTACTCAGACAACCAGCCTGGTGTGTTGATTCAGGT 20603488 Query 350512 ATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAG 350571 | |||||||||||||| ||| || || || | || | || | Sbjct 20603487 GTACGAAGGTGAACGTGCGATGACTCGTGACAACAACCTGTTGGGCAAGTTCGAGTTGTC 20603428 Query 350572 TGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTC 350631 || || ||||| ||| | ||||| |||||||||||||| | ||||| || ||| | Sbjct 20603427 TGGTATCCCACCGGCTCCTCGTGGAGTGCCTCAGATTGAAGTGACCTTCGACATAGATGC 20603368 Query 350632 AAATGGTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 || ||||| || ||||| | || || || || || Sbjct 20603367 CAACGGTATCTTGAATGTGTCGGCGGTGGACAAGTC 20603332 Score = 174 bits (192), Expect = 5e-38 Identities = 406/612 (66%), Gaps = 3/612 (0%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 |||| | || || ||| | |||||||||| |||||||||| ||| | ||| | | Sbjct 20650103 CGCTGTTGGTATTGATCTTGGTACTACTTTCTCTTGTGTTGGTGTATTTCAACACGGGAA 20650044 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 || ||||| || || ||||| || || || | || || || || |||| || || Sbjct 20650043 AGTCGAAATTATAGCTAATGACCAGGGCAATCGCACTACCCCTAGTTATGTTGGCTTCAC 20649984 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 || || ||||| |||| |||||| |||| || || |||| ||| || || | || Sbjct 20649983 AGACACCGAGCGGTTGATCGGTGATGCTGCCAAGAACCAAGTGGCTATGAACCCTACCAA 20649924 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATC 349437 || || || ||||| ||||| || |||||| | | || ||| | | || Sbjct 20649923 CACCGTGTTCGATGCCAAGCGTCTCATTGGTCGTCGATTCGATGATAGCGTTGTGCAGGG 20649864 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||| | || |||| ||||| ||| || || | || | ||||| | || || Sbjct 20649863 GGATATGAAGCATTGGCCTTTCCATGTGGTC---AATGTTGGAGGCAAACCGAAGATCGA 20649807 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 |||||| || || || || | || || | | ||||| || || || ||||| || Sbjct 20649806 GGTTGAGTACAAGGGAGAGAAGAAGTCCTTCTATGCAGAAGAGATCTCCTCCATGGTGTT 20649747 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 | || |||||||| | ||||| || || | || | || || ||||||| || Sbjct 20649746 GCTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGGCAAGACTGTGGAAAATGCTGTCAT 20649687 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||||||||||||||| || ||||| ||||||| || ||||| |||||||| || Sbjct 20649686 TACTGTACCAGCCTACTTCAATGACAGCCAGCGTCAGGCCACAAAGGATGCTGGTGCTAT 20649627 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||| | |||||||| |||| |||||||| |||||||| || || || || || || Sbjct 20649626 ATCGGGTATGAATGTTCTCCGAATAATTAATGAGCCCACTGCGGCTGCCATCGCGTACGG 20649567 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 | || || | | | | ||| || | | || || ||||| |||||||| || Sbjct 20649566 ATTGGACAAGAAGGTGGGCTCTGAACGCAACGTGTTGATCTTCGATTTGGGTGGTGGCAC 20649507 Query 349798 TTTTGATGTATC 349809 ||| ||||| || Sbjct 20649506 TTTCGATGTCTC 20649495 >seq1091 Length=18644 Score = 188 bits (208), Expect = 2e-42 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || |||||||| |||||||| || ||||| || || || ||||| Sbjct 1721 ACCACCACGAAGGCGAAGCACAAGATGTAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 1662 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||||||||| || ||||||||||| ||||| || || || || || Sbjct 1661 GAGAGTACGACCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGG 1602 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| ||||| || || ||||| ||||| || ||||| ||||| | ||| || || || Sbjct 1601 AATGCCTTCCTTGTCTTGAATCTTAGCCTTCACATTCTCAATGGTATCGCTGGGCTCGAC 1542 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||||||||| |||||||| || || || || ||||| ||||||||| Sbjct 1541 TTCAAGTGTAATGGTCTTTCCTGTGAGAGTCTTAACAAAGATCTGCATT 1493 Score = 176 bits (194), Expect = 1e-38 Identities = 178/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||||| | | || | ||||| || ||||| ||||| || || || || Sbjct 1496 CATTCCACCACGTAGACGCAATACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTC 1437 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||||||||| || ||||||||||| |||||||| || || || Sbjct 1436 AGAGAGGGTACGACCATCTTCAAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCTGG 1377 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || || ||||| ||||| |||||||| || || | ||| || || Sbjct 1376 GGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTTACATTCTCGATGGTATCGCTGGGCTC 1317 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||| || |||| || || ||||| || || || ||||||||||||||| Sbjct 1316 AACTTCGAGAGTAATAGTTTTACCGGTGAGAGTCTTCACAAAAATCTGCATT 1265 >seq778 Length=21138827 Score = 176 bits (194), Expect = 1e-38 Identities = 165/209 (79%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| ||||| || || || || || || || || | || || |||||||| | Sbjct 14606156 CAAG-TGAAGGGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCTTCTA 14606098 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| | |||||| ||||| || ||||| ||||| |||||||||| Sbjct 14606097 GCTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCCTTATCCTGAA 14606038 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || |||||||| ||||| ||||| || || ||||||||||| || | || || | Sbjct 14606037 TTTTGGCCTTTACATTTTCAATGGAATCTGAAGGCTCAACTTCAAGAGTGATAGTTTTGC 14605978 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | |||| || || ||||||||||||||| Sbjct 14605977 CAGTTAAAGTCTTGACAAAAATCTGCATT 14605949 Score = 107 bits (118), Expect = 6e-18 Identities = 222/328 (68%), Gaps = 2/328 (1%) Strand=Plus/Minus Query 378183 ATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGT 378242 |||||| | ||||| | | || | ||||| || || || || |||||||||||| Sbjct 8378245 ATCATACTTCACCATCACAGACTCCATAGCTTTGATGAGACGGCGTTGAATATAACCAGT 8378186 Query 378243 TT-GACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGA 378301 || | || || || || || |||||||| ||||| ||||||||||||| |||||||| | Sbjct 8378185 TTCGGCT-GTCTTGACAGCGGTATCAATCAAACCTTCACGACCACCCATGGCATGGAAAA 8378127 Query 378302 ATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTG 378361 | || ||||| ||||| || ||| ||| | | ||| |||| | ||| || || | | | Sbjct 8378126 AGAACTCAGTTGGAGTCAGGCCAGCAAGATAGGAATTCTCCACAAAACCCCTAGACTCAG 8378067 Query 378362 GCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTC 378421 | | |||| || | |||| || | || |||| || ||| | || |||| Sbjct 8378066 GACCGTAGTCATCTTGGATGAAATGGGGAAGGGTTCGATGGCGGAAACCAAAGGGGATTC 8378007 Query 378422 GTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATTTAAATCAC 378481 |||| || || || ||||| || || | | || | ||| | ||||| | | Sbjct 8378006 GTTTACCCTCTACGTTCTGCTGCCCCACACAGGCAATAACTTGGGAGATATTAATCTTGG 8377947 Query 378482 TACCTTTAGACCCAGCATTAACCATAAT 378509 ||| || || |||||| ||||||||| Sbjct 8377946 AACCCTTTGAACCAGCAACAACCATAAT 8377919 >seq3456 Length=47684 Score = 168 bits (186), Expect = 2e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||| ||||| | | || |||||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 38756 ACCGCCACGAAGACGAAGCACAAGATGTAGAGTCGACTCCTTTTGGATATTGTAATCAGA 38815 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || ||||| || || || |||||||| || || ||||| ||||| || || Sbjct 38816 AAGCGTACGACCTTCTTCTAGCTGCTTACCAGCAAAAATGAGTCGTTGTTGATCTGGGGG 38875 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || ||||||||||| || | || || || ||||||| |||| || ||||| Sbjct 38876 GATGCCCTCCTTATCCTGAATCTTCGACTTCACGTTCTCAATCGTATCACTCGGCTCAAC 38935 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||||| ||| || || || || ||||| |||||||| ||||| Sbjct 38936 CTCGAGTGTAATTGTTTTGCCAGTGAGGGTTTTCACAAAAATTTGCAT 38983 >seq762 Length=501 Score = 141 bits (156), Expect = 3e-28 Identities = 299/437 (68%), Gaps = 8/437 (2%) Strand=Plus/Minus Query 349821 TTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 |||| || || || || || || || |||||||||| || || || | ||||| || | Sbjct 484 TTGAGGACGGCATCTTCGAGGTGAAGTCAACTGCTGGCGACACGCACTTGGGTGGTGAGG 425 Query 349881 ATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTG 349940 | || ||||||||| | ||| ||||||||||| ||||| ||||| ||||| | || Sbjct 424 ACTTCGATAATCGTATGGTTGATCATTTTGTTAACGAATTCAAGCG-CAAGC-ATAAGGA 367 Query 349941 ATATTGGAGATAATCCTA--GAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 | | | || | | | | |||| || ||||| ||||||||||||| || | || || Sbjct 366 AGACTTAAGGTCAAACAAACGAGCTATTCGTCGATTAAGAACTGCGTGCGAGAGAGCAAA 307 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTG-ATGGCA 350057 | | || | || | | || | |||||| |||||||| ||| || |||| | Sbjct 306 GAGAACCCTCAGTTCAAGCTCTCAGGCAAATATTGAGATTGATTC-GTTGTTGAATGGAA 248 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 ||||||| | | ||||| || ||||| || || ||| | ||| ||||| || | Sbjct 247 TTGATTTCTACACCACCATTACTCGGGCTCGATTCGAGGAACTTTGTGGTGATCTATTCA 188 Query 350118 GAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAA-ATCAG 350176 || || | || || || || || | || ||||| || ||| ||||| |||| Sbjct 187 GAAGCACTCTTGAACCAGTTGAGAAGGCTCTACGTGATGCTAAGATGGACAAAAGCTCAG 128 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || ||||| | || |||||||| ||||| || |||||||| || || ||| | ||||| Sbjct 127 -TTCATGAAATTGTATTAGTTGGAGGTTCAACTCGTATTCCGAAGGTGCAAAAATTACTC 69 Query 350237 TCTGAGTTTTTTAATGG 350253 || || |||||||| Sbjct 68 CAAGATTTCTTTAATGG 52 Score = 114 bits (126), Expect = 4e-20 Identities = 323/488 (66%), Gaps = 6/488 (1%) Strand=Plus/Plus Query 183264 GCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTAAA 183322 ||||| || || ||||| || || || || || || | | | || || |||||||| Sbjct 1 GCACCGTAGGCCACAGCCTCGTCCGGATTGATGGA-CTTGTTCAACTCGCGACCATTAAA 59 Query 183323 AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTAC 183382 || ||| || | || ||| | || ||||| | ||||||||| || |||||||| | Sbjct 60 GAAATCTTGGAGTAATTTTTGCACCTTCGGAATACGAGTTGAACCTCCAACTAATACAAT 119 Query 183383 TTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCA 183441 ||||| || | | ||||| || | | ||| || | | || ||||| || || | Sbjct 120 TTCAT-GAACTGAGCTTTTGTCCATCTTAGCATCACGTAGAGCCTTCTCAACTGGTTCAA 178 Query 183442 TAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaa 183501 ||| |||| |||| ||| ||| | || || |||| || | ||| | | | Sbjct 179 GAGTGCTTCTGAATAGATCACCACAAAGTTCCTCGAATCGAGCCCGAGTAATGGTGGTGT 238 Query 183502 aaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATA 183561 | || ||||| ||||| | || |||||||| ||||| || || | ||| | Sbjct 239 AGAAATCAATTCCATTCAACAACGAATCAATCTCAATATTTGCCTGAGAGCTTGAACTGA 298 Query 183562 ATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATC-TTGGATTATCT 183620 ||||| || |||| || || || ||||||| |||||| | | || || | || | Sbjct 299 GGGTTCTCTTTGCTCTCTCGCACGCAGTTCTTAATCGACGAATAGCTCGTTTGTTTGACC 358 Query 183621 GTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTA 183680 ||| |||| ||||| || | || ||||| ||| |||||| | || | | || Sbjct 359 TTAAG-TCTTCCTTATGCTTGCGCTTGAATTCGTTAACAAAATGATCAACCATACGATTA 417 Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 || || || |||||||| || || || ||||||||||| | || || || || || ||| Sbjct 418 TCGAAGTCCTCACCACCCAAGTGCGTGTCGCCAGCAGTTGACTTCACCTCGAAGATGCCG 477 Query 183741 TCTTCAAT 183748 || ||||| Sbjct 478 TCCTCAAT 485 >seq781 Length=13122981 Score = 89.7 bits (98), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 266976 GGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATTCCTGAA 267035 || || |||||| | |||||||| ||||| |||||| ||||| | | | || Sbjct 4635443 GGTGACAAATTTGCCTCCCGCCACGGCCAAAAGGGTACCTGTGGTATTCTCTACCGTCAA 4635384 Query 267036 GAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCATGCT 267095 || |||||||||| | | || || || | || ||| ||||||| |||||||| ||| Sbjct 4635383 GAGGATATGCCATTCACTTGTGAAGGTATCACTCCAGATGTTATTATCAATCCTCACGCT 4635324 Query 267096 ATTCCTAGTCGTATGACAATTGGTCAATT 267124 ||||| ||||||||||| || ||||| || Sbjct 4635323 ATTCCCAGTCGTATGACTATCGGTCACTT 4635295 >seq783 Length=7474785 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 235881 TCAATATAG-GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACC 235939 |||| || | |||||||||| ||| | |||||| |||||||||||||||||||||| || Sbjct 4970405 TCAAGATCGTGGGGATGTAGCTCAGT-GGTAGAGCGCTCGCTTTGCATGCGAGAGGCCCC 4970463 Query 235940 GGGATCAAAACCCAGCATCTCCA 235962 ||| |||| ||| ||||||||| Sbjct 4970464 GGGTTCAATCCCCGGCATCTCCA 4970486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515183674080329