Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1443 100 4e-16 >seq1443 Length=26160 Score = 100 bits (110), Expect = 4e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 ||||||||||||||||||||||| || ||| | || ||| | ||||| || | | | Sbjct 12377 TACAAGACTGTCTGGGAGATTCCACAGAAAACGATTATTGATCTAGCTGCAGATCGTGCT 12318 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | ||| || |||||||| ||||| ||||| || | || |||| ||| || Sbjct 12317 CCTTTCATAGATCAGAGTCAGTCGTTGAATCTCCACATGAAGGAACCCAACTATGGTAAG 12258 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219 || ||||| || || || || || ||||| ||||| || ||||| || |||||||| || Sbjct 12257 ATCACTTCCATGCATTTCTATGCGTGGAAGAAGGGACTGAAGACTGGAATGTACTACCTC 12198 Query 98220 AGAAC 98224 |||| Sbjct 12197 CGAAC 12193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740909024353120