Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1516 87.8 9e-13 seq1305 87.8 9e-13 >seq1516 Length=25679 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 16251 GGATCGAACCCTCGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTA 16197 >seq1305 Length=27586 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 18166 GGATCGAACCCTCGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTA 18112 Lambda K H 0.642 0.411 0.926 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261439533588112