Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 >seq2 Length=118199 Score = 118 bits (130), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 ||| || ||| ||| ||||||||||||||| || | || || |||| || || Sbjct 63185 GGCGAAATCTGTGTGCAGACCCTCGTCACGGCTAATCAACTCGTTACTGAAGGTGAGACC 63244 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || ||||||||||||||||| |||| ||||||||||||||||| | Sbjct 63245 CGGCATTAGGCCACGCTTCTTCAACCAGAAGATCGAGGCGAATGAACCCGAGAAGAAAAC 63304 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTG-TGTCAA 126224 |||||||| || ||||| | | |||||| ||| | | |||| ||||| | | | Sbjct 63305 CCCCTCCACTGCAGCAAACGCCATAACACGCTCCGCATACG-TCGCGTCTTTGTTCGCGA 63363 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 |||| ||| ||||| | |||||| |||| | ||| || | |||| ||||| | | Sbjct 63364 TCCACCTCAGTGCCCAATCCGCCTTCTTCTTCACACATGGCAGAGTCTCAATCGCATTGA 63423 Query 126285 AGAG 126288 |||| Sbjct 63424 AGAG 63427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597232546292960