Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq869 192 5e-43 seq5843 179 3e-39 seq7138 167 2e-35 seq4364 145 6e-29 seq14526 141 7e-28 seq14732 138 9e-27 seq2737 138 9e-27 seq3742 131 1e-24 seq1718 129 5e-24 seq1635 107 2e-17 seq1335 86.0 5e-11 >seq869 Length=33047 Score = 192 bits (212), Expect = 5e-43 Identities = 379/556 (68%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 549977 ATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTT 550036 |||||||| | |||| | ||||| ||| | || || || | ||| |||||||| Sbjct 21216 ATGTCAAAGGGACCAGCTGTCGGTATTGATCTTGGTACTACTTTCTCTTGCGTTGGTGTA 21157 Query 550037 TGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCT 550096 | ||| |||| ||||| ||||| || || ||||| || || || | ||||| || | Sbjct 21156 TTCCAACATGGAAAAGTGGAAATCATAGCTAATGACCAGGGCAATCGCACTACCCCCAGT 21097 Query 550097 TATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACT 550156 ||||| ||||||| || || || | | | | |||||||| || || | || | || Sbjct 21096 TATGTCGCTTTCACCGACACCGAGCGTCTGATCGGTGATGCTGCCAAGAACCAGGTGGCT 21037 Query 550157 GGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGAT 550216 ||||||||||| ||| |||| ||||| |||||| | ||||| | | ||| ||||| Sbjct 21036 ATGAATCCTACCAACACTGTTTTCGATGCCAAACGTCTCATTGGTCGTCGATTTGATGAT 20977 Query 550217 TCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAA 550276 | ||| |||| |||||||| |||||||| ||||| | | || ||| ||| Sbjct 20976 AGTATTGTGCAGGATGATATGAAACATTGGCCCTTCCATGTGATCAACTCCGGTGGCAAA 20917 Query 550277 CCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAAT 550332 || | || | || | | |||| | | || || || | ||||| | || Sbjct 20916 CCGAAGATCG-AGGTGGAGTTCAAGGGTGAG---AAGAAGTCGTTCTTTGCAGAAGAGAT 20861 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AG 550391 || || ||||| || |||| ||||| | ||||| |||| |||| |||| || Sbjct 20860 CTCCTCCATGGTGTTGTTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGG-GAAGACAG 20802 Query 550392 TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTA 550451 | || || || || || ||||| ||||| || || |||||| || |||||||| || | Sbjct 20801 TGACAGACGCCGTGATTACTGTGCCAGCCTACTTCAATGACAGTCAGCGTCAAGCCACGA 20742 Query 550452 AAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTG 550511 | ||||||||| ||| |||| | || |||||||| || ||||| || || ||||| | Sbjct 20741 AGGATGCTGGAGTGATTTCTGGCTTGAACGTTCTTCGAATCATCAACGAGCCCACTGCGG 20682 Query 550512 CTGCACTTGCATATGG 550527 |||| | || ||||| Sbjct 20681 CTGCCATCGCGTATGG 20666 Score = 187 bits (206), Expect = 2e-41 Identities = 378/556 (68%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 549977 ATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTT 550036 |||||||| | |||| | ||||| ||| | || || || | ||| |||||||| Sbjct 7536 ATGTCAAAGGGACCAGCTGTCGGTATTGATCTTGGTACTACTTTCTCTTGCGTTGGTGTA 7477 Query 550037 TGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCT 550096 | ||| |||| ||||| ||||| || || ||||| || || || | ||||| || | Sbjct 7476 TTCCAACATGGAAAAGTGGAAATCATAGCTAATGACCAGGGCAATCGCACTACCCCCAGT 7417 Query 550097 TATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACT 550156 ||||| ||||||| || || || | | | | |||||||| || || | || | || Sbjct 7416 TATGTCGCTTTCACCGACACCGAGCGTCTGATCGGTGATGCTGCCAAGAACCAGGTGGCT 7357 Query 550157 GGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGAT 550216 ||||||||||| ||| |||| ||||| |||||| | ||||| | | ||| ||||| Sbjct 7356 ATGAATCCTACCAACACTGTTTTCGATGCCAAACGTCTCATTGGTCGTCGATTTGATGAT 7297 Query 550217 TCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAA 550276 | ||| |||| |||||||| |||||||| ||||| | | || ||| ||| Sbjct 7296 AGTATTGTGCAGGATGATATGAAACATTGGCCCTTCCATGTGATCAACTCCGGTGGCAAA 7237 Query 550277 CCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAAT 550332 || | || | || | | |||| | || || || | ||||| | || Sbjct 7236 CCGAAGATCG-AGGTGGAGTTCAAGGGCGAG---AAGAAGTCGTTCTTTGCAGAAGAGAT 7181 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AG 550391 || || ||||| || |||| ||||| | ||||| |||| |||| |||| || Sbjct 7180 CTCCTCCATGGTGTTGTTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGG-GAAGACAG 7122 Query 550392 TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTA 550451 | || || || || || ||||| ||||| || || |||||| || |||||||| || | Sbjct 7121 TGACAGACGCCGTGATTACTGTGCCAGCCTACTTCAATGACAGTCAGCGTCAAGCCACGA 7062 Query 550452 AAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTG 550511 | ||||||||| ||| |||| | || |||||||| || ||||| || || ||||| | Sbjct 7061 AGGATGCTGGAGTGATTTCTGGCTTGAACGTTCTTCGAATCATCAACGAGCCCACTGCGG 7002 Query 550512 CTGCACTTGCATATGG 550527 |||| | || ||||| Sbjct 7001 CTGCCATCGCGTATGG 6986 >seq5843 Length=8949 Score = 179 bits (198), Expect = 3e-39 Identities = 365/537 (68%), Gaps = 14/537 (3%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||||||||| |||||||| | ||||||||||| | ||| |||| || ||||| Sbjct 5845 GGTATAGATTTGGGAACCACTTTCTCCTGTGTTGGTGTGTTCCAACATGGCAAGGTTGAT 5904 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||| |||||||| || || | |||||||| |||||| | ||||| ||| Sbjct 5905 ATCATTGCAAATGATCAGGGCAATCGTACTACTCCTAGTTATGTCGCGTTCACAGAACAC 5964 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174 || | ||| |||| |||||||| || | || ||||| || || ||| ||| || Sbjct 5965 GAGCGTTTGATTGGCGATGCAGCTAAGAACCAAGTAGCCA-TG--AACCCTGACAACACA 6021 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || || || |||||| | ||||| | | || | ||| ||| |||| ||| Sbjct 6022 GTGTTCGACGCCAAACGTCTTATTGGTCGTCGATTCGAAGATCAAGTTGTACAGGATGAT 6081 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 ||||| |||||||||||||| | || || | | || ||||| | || | || || | Sbjct 6082 ATGAAACATTGGCCTTTCCATGTGGTCAACGCTGGAGGCAAACCGAAGATCG-AGGTAAT 6140 Query 550295 CATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 |||| | | || || || | ||||| | || || || ||||| || | Sbjct 6141 GTACAAGGGTGAG---AAGAAGTCGTTCTTTGCAGAAGAGATCTCCTCCATGGTGTTGTT 6197 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||| ||||| | ||||| |||| |||| || ||| | |||||||| || || Sbjct 6198 GAAGATGAAGGAGACAGCTGAGGCTTACCTTGGGAAAACAGTGAAAGATGCAGTCATTAC 6257 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| || || || || || |||| || |||||||| || || |||||||| || | Sbjct 6258 TGTGCCGGCCTACTTCAACGACTGTCAGCGTCAAGCCACGAAGGATGCTGGTGCCATATC 6317 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || | || |||||||| || ||||| || || ||||| ||||| | || ||||| Sbjct 6318 GGGCTTGAACGTTCTTCGAATCATCAACGAGCCCACTGCGGCTGCCATCGCGTATGG 6374 >seq7138 Length=6853 Score = 167 bits (184), Expect = 2e-35 Identities = 365/542 (67%), Gaps = 10/542 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | || || || | ||| |||||||| | ||| |||| || Sbjct 6423 AGCTGTTGGAATTGATCTTGGTACTACTTTCTCTTGCGTTGGTGTATTCCAACATGGAAA 6364 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || || ||||| || || || | ||||| || |||||| ||||||| Sbjct 6363 AGTGGAAATCATAGCTAATGACCAGGGCAATCGCACTACCCCCAGTTATGTCGCTTTCAC 6304 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | | | | |||||||| || || | || | || ||||||||||| Sbjct 6303 CGACACCGAGCGTCTGATCGGTGATGCTGCCAAGAACCAGGTGGCTATGAATCCTACCAA 6244 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| |||| ||||| |||||| | ||||| | | ||| ||||| | ||| |||| Sbjct 6243 CACTGTTTTCGATGCCAAACGTCTCATTGGTCGTCGATTTGATGATAGTATTGTGCAGGA 6184 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 |||||||| |||||||| ||||| | | || ||| ||||| | || | || Sbjct 6183 TGATATGAAACATTGGCCCTTCCATGTGATCAACTCCGGTGGCAAACCGAAGATCG-AGG 6125 Query 550291 TACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | |||| | | || || || | ||||| | || || || ||||| | Sbjct 6124 TGGAGTTCAAGGGTGAG---AAGAAGTCGTTCTTTGCAGAAGAGATCTCCTCCATGGTGT 6068 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTA 550405 | |||| ||||| | ||||| |||| |||| |||| ||| || || || || Sbjct 6067 TGTTGAAGATGAAGGAGACAGCTGAGGCTTACCTTGG-GAAGACAGTGACAGACGCCGTG 6009 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || ||||| ||||| || || || ||| || |||||||| || || |||||||| Sbjct 6008 ATTACTGTGCCAGCCTACTTCAACGACAGTCAGCGTCAAGCCACGAAGGATGCTGGTGCC 5949 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 || | || | || |||||||| || ||||| || || ||||| ||||| | || ||| Sbjct 5948 ATATCGGGCTTGAACGTTCTTCGAATCATCAACGAGCCCACTGCGGCTGCCATCGCGTAT 5889 Query 550526 GG 550527 || Sbjct 5888 GG 5887 >seq4364 Length=12272 Score = 145 bits (160), Expect = 6e-29 Identities = 168/222 (76%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| | ||||| || | ||| ||| ||||| || ||||| |||| ||||| Sbjct 3918 GAGACGCAAAACAAGGTGTAAGGTGGACTCCTTTTGG--ATGTTGTAGTCAGAAAGAGTG 3975 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| | ||| || ||||||||||| |||||||| || || || || ||||| Sbjct 3976 CGTCCATCTTCCAATTGCTTGCCGGCAAAAATCAGTCTTTGTTGGTCTGGTGGGATTCCC 4035 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || |||||| ||||||||||||| | | | || |||||| Sbjct 4036 TCCTTATCTTGAATCTTGGCTTTTACATTCTCAATTGTATCACT-AGGTTCCACTTCGAG 4094 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || |||||||||||||| |||||||| ||||| Sbjct 4095 CGTTATAGTCTTCCCAGTAAGAGTTTTTACGAAAATCTGCAT 4136 Score = 141 bits (156), Expect = 7e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| ||| ||||| ||||||||||||| | ||| | ||| || | Sbjct 3474 CAAG-TGAAGCGTAGACTCTTTTTGTATATTGTAATCAGACAAAGTGCGGCCATCCTCTA 3532 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||||| ||||| || ||||| | ||||||||| |||||||||||||| |||||||||| Sbjct 3533 ATTGTTTACCGGCGAATATAAGACGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAA 3592 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 |||| |||||| ||||||| |||| || | | ||| || |||| |||||||| Sbjct 3593 TTTTCGCTTTTACATTTTCAATTGAATCACTGGGTTCAACTTCAAGGGTAATAGTTTTAC 3652 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || || || ||||| || ||||| Sbjct 3653 CAGTTAGGGTCTTGACGAAGATCTGCAT 3680 Score = 104 bits (114), Expect = 2e-16 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || || || |||||||| ||||| ||| ||||| |||||||| || | || || | Sbjct 7045 AGGCGAAGCACAAGATGTAGGGTGGATTCCTTTTGG--ATATTGTAGTCCGAGAGGGTAC 6988 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||||||| || || || ||||| ||||| | || || || || ||||| |||| Sbjct 6987 GACCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCTT 6928 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | || |||||||| || || || ||| || |||||| || | ||| || | Sbjct 6927 CCTTGTCTTGAATCTTAGCCTTAACATTCTCTATGGTATCACTGGGCTCGACTTCAAGTG 6868 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||| ||||| || || ||||| ||||| Sbjct 6867 TAATGGTTTTACCAGTGAGAGTCTTCACAAAAATCTGCAT 6828 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || || || ||||| || ||| ||| || |||||||| |||| |||||| | | Sbjct 3691 AGTCGAAGCACTAGATGTAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAGAGTACGT 3750 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | || || || || ||||| |||| ||| ||||| || || || || || Sbjct 3751 CCGTCTTCCAACTGCTTGCCAGCGAAAATGAGTCGTTGTTGATCTGGGGGGATGCCCTCC 3810 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || ||||| || ||| || ||| || | ||| | | | ||||||||| Sbjct 3811 TTGTCCTGAATCTTCGCTTTCACATTCTCTATCGAGTCACTCGGCTCAACCTCGAGAGTA 3870 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||||| || || || || || ||||||||||| Sbjct 3871 ATTGTTTTACCGGTGAGGGTCTTCACAAAAATTTGCAT 3908 >seq14526 Length=1284 Score = 141 bits (156), Expect = 7e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| ||| ||||| ||||||||||||| | ||| | ||| || | Sbjct 957 CAAG-TGAAGCGTAGACTCTTTTTGTATATTGTAATCAGACAAAGTGCGGCCATCCTCTA 1015 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||||| ||||| || ||||| | ||||||||| |||||||||||||| |||||||||| Sbjct 1016 ATTGTTTACCGGCGAATATAAGACGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAA 1075 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 |||| |||||| ||||||| |||| || | | ||| || |||| |||||||| Sbjct 1076 TTTTCGCTTTTACATTTTCAATTGAATCACTGGGTTCAACTTCAAGGGTAATAGTTTTAC 1135 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || || || ||||| || ||||| Sbjct 1136 CAGTTAGGGTCTTGACGAAGATCTGCAT 1163 Score = 132 bits (146), Expect = 4e-25 Identities = 166/223 (74%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| | ||||| || | ||| ||| ||||| || ||||| |||| ||||| Sbjct 717 GAGACGCAAAACAAGGTGTAAGGTGGACTCCTTTTGG--ATGTTGTAGTCAGAAAGAGTG 774 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| | ||| || ||||||||||| |||||||| || || || || ||||| Sbjct 775 CGTCCATCTTCCAATTGCTTGCCGGCAAAAATCAGTCTTTGTTGGTCTGGTGGGATTCCC 834 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || |||||| |||||| |||||| | | | || ||| || Sbjct 835 TCCTTATCTTGAATCTTGGCTTTTACATTCTCAATCGTATCACT-AGGTTCCACTTCAAG 893 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||| || ||||||||||| || |||||||| |||||| Sbjct 894 TGTTATAGTCTTCCCAGTAAGAGTCTTTACGAAAATCTGCATA 936 Score = 87.8 bits (96), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || ||||| || || ||| || |||||||| ||| ||||| | | Sbjct 490 AGACGAAGCACTAGATGGAGAGTTGATTCCTTCTGGATATTGTAGTCATTAAGAGTACGT 549 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || || || ||||| |||| ||| ||||| || || || || || Sbjct 550 CCGTCTTCCAGCTGCTTGCCAGCGAAAATGAGTCGTTGTTGATCTGGGGGGATGCCCTCC 609 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || ||||| || ||| || ||| || | ||| | | | ||||||||| Sbjct 610 TTGTCCTGAATCTTCGCTTTCACATTCTCTATCGAGTCACTCGGCTCAACCTCGAGAGTA 669 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||||| || || || || || ||||||||||| Sbjct 670 ATTGTTTTACCGGTGAGGGTCTTCACAAAAATTTGCAT 707 >seq14732 Length=1210 Score = 138 bits (152), Expect = 9e-27 Identities = 184/256 (72%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| ||||| || | |||||||||||| | ||| |||| || || ||| Sbjct 410 GGTATCGATTTGGGAACAACCTTCTCTTGTGTTGGTGTGTTTCAACATGGCAAGGTGGAA 351 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||| ||||| || || || ||| |||||| |||||| ||||||| || || Sbjct 350 ATTATTGCTAATGACCAGGGCAATCGAATCACTCCAAGTTATGTCGCTTTCACCGACACC 291 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | |||||||| || || | || | || |||||| ||| |||||| Sbjct 290 GAGCGTCTGATCGGTGATGCTGCTAAGAACCAGGTGGCTATGAATCCTGTCAACACTATT 231 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| |||||| | ||||| | | || | ||| ||| |||| |||||| Sbjct 230 TTTGATGCCAAACGTCTCATTGGTCGTCGATTCGAAGATCAAGTTGTACAGGATGATATG 171 Query 550238 AAGCATTGGCCTTTCC 550253 || |||||||| |||| Sbjct 170 AAACATTGGCCCTTCC 155 >seq2737 Length=17923 Score = 138 bits (152), Expect = 9e-27 Identities = 343/517 (66%), Gaps = 9/517 (2%) Strand=Plus/Minus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||| | ||||||| |||||||| || || || ||||| || ||| | | Sbjct 16193 GTGTTGGTGTCTTCAAAAATGGACGGGTTGAAATCATCGCAAACGATCAGGGCAACCGTA 16134 Query 550086 CTACTCCATCTTATGTTTCTTTCACGGAAACTG---AACATTTAGTTGGTGATGCAGCAA 550142 || || || || || ||||||| | |||| ||| | | | || ||||| || | Sbjct 16133 TCACACCGTCGTACGTCGCTTTCACAAACACTGGTGAACGTCTTATCGGCGATGCTGCCA 16074 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 || | ||| || || |||| |||||| |||||||||| || ||| | || || Sbjct 16073 AAAACCAACTGACATCGAACCCTAGAAATACTCTTTTTGATGCCAAGCGTCTTATAGGCC 16014 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 ||| ||| ||||| | |||||||| |||||||| | | |||||| || | | | Sbjct 16013 GAACCTTTGATGATAAGGATGTTCAGGAGGATATGAAACGATATCCTTTCAAAGTCATCA 15954 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGG--ATCTGTTAAACAATTTT- 550319 | || ||||| || || |||| | || | || || | | || ||| Sbjct 15953 AGAAGGGTGACAAACCATACATGGAAGTT---CAAGTTGGCGATGAGGTCAAGGCTTTCG 15897 Query 550320 CACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTG 550379 | || ||| || | || | |||||||| || ||||| | || |||| | Sbjct 15896 CTCCTGAAGAAGTCTCGGCCATGGTTTTGGGCAAGATGAAGGAGGTTGCTGAGGCTTATC 15837 Query 550380 TTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 | ||| ||||| |||| ||| | || || ||||| || || ||||| | |||| Sbjct 15836 TCGGTACTCCGGTTACCCATGCCGTAGTGACCGTGCCAGCCTACTTCAATGATGCTCAAC 15777 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 ||||||| || |||||||| || |||||||| || | | | |||||||| ||||||| Sbjct 15776 GTCAAGCAACCAAAGATGCAGGTGCCATTGCTGGTCTAACTATCCTTCGTATCATCAATG 15717 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||| ||||| || || |||| || || | ||||| Sbjct 15716 AACCAACTGCCGCAGCTATTGCCTACGGTTTGGATAA 15680 Score = 132 bits (146), Expect = 4e-25 Identities = 363/551 (66%), Gaps = 10/551 (2%) Strand=Plus/Minus Query 552041 TGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGA 552100 ||||||||| |||| || ||| ||||||||||| | ||| | | || || | | | Sbjct 15322 TGATCTCTTCAGAAGCACTATTAAACCAGTAGAAAATGTTATGAAGGACTCGGATCTCAA 15263 Query 552101 TAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCG 552160 ||| | | ||||| ||||| | |||||||| || || |||||||| || ||| Sbjct 15262 AAAAGAAGATATTCATGATATTGTCTTGGTTGGTGGCTCGACTAGAATTCCAAAGGTTCA 15203 Query 552161 CGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATG 552219 ||| | || || || ||||||||| || | |||| | || | || || |||| Sbjct 15202 AGAACTCGTCAAAGAATT-TTTCAATGGCAAGGAGTTAAGCAGAGGTATCAACCCTGATG 15144 Query 552220 AGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA- 552278 |||||||||| |||||||| || | ||||| | | | | ||| || |||| Sbjct 15143 AGGCTGTTGCATATGGTGCTGCTGTGCAAGCTGGTGTCATAAGTGG------TGTTGAAG 15090 Query 552279 AAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTT 552338 | ||| |||| || ||| | ||||| || || |||| ||| | || || ||| Sbjct 15089 ATACT-GGTGATATCGTTCTTCTTGATGTCTGCCCACTTACTCTGGGTATTGAGACTGTT 15031 Query 552339 GGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGT 552398 || ||| ||||||| || || || | || || || |||||| || || |||| Sbjct 15030 GGTGGTGTTATGACAAAACTCATTGGCAGGAACACCGTAATTCCTACAAAGAAGTCTCAA 14971 Query 552399 GTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAA 552458 || || ||||| | | ||| | ||| | |||| || || || | | |||||| ||| Sbjct 14970 GTCTTCTCTACTGCTGCTGATGACCAACCAACTGTCACCATCCAGGTCTATGAAGGTGAA 14911 Query 552459 AGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCT 552518 | || || ||||||||| || | |||| || || | || |||||||| Sbjct 14910 CGTCCCTTGACCAAAGATAATCATTTCTTGGGTAAATTCGATCTTACTGGCATTCCTCCG 14851 Query 552519 GCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTG 552578 ||||| || || | || ||||| ||||| || || || || |||| || || || || Sbjct 14850 GCTCCACGCGGTATCCCACAAATCGAAGTCACATTTGAAATTGATGTGAACGGCCTTCTG 14791 Query 552579 AATGTGACTGC 552589 | ||| |||| Sbjct 14790 CAAGTGTCTGC 14780 >seq3742 Length=14143 Score = 131 bits (144), Expect = 1e-24 Identities = 210/302 (70%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 552297 CTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAAT 552356 ||| | |||||||||||||| ||||| ||| | ||||| | || || | | || || Sbjct 7199 CTTCTTGATGTTACTCCTCTTTCTCTCGGTATTGAAACCCTCGGTGGAGTGTTTACAAAG 7140 Query 552357 CTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCA 552416 ||||| | |||| || || || || || ||||| | || ||||| ||| | | Sbjct 7139 CTTATTAACCGAAACACAACCATCCCAACCAAGAAATCGCAAGTGTTTTCCACGGCTGCC 7080 Query 552417 GATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGAT 552476 ||| ||||||| || ||| || | | |||| ||| | | | | | ||| Sbjct 7079 GATGGTCAAACTCAGGTCGAGATTAAAGTATACCAAGGCGAACGTGAGATGGCCATGGAT 7020 Query 552477 AATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCG 552536 || || | |||||| || | | | |||||||| |||||||||||||| ||||| Sbjct 7019 AACAAACTTCTTGGTCGCTTCTCTCTTGTTGGTATTCCACCTGCTCCTCGTGGTGTACCA 6960 Query 552537 CAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGAT 552596 ||||||||||| ||||| |||||||| ||||| || ||| ||||||| ||||| | ||| Sbjct 6959 CAAATTGAAGTCACTTTTGATATCGACGCCAACGGTATTGTGAATGTTTCTGCTAGAGAT 6900 Query 552597 AA 552598 || Sbjct 6899 AA 6898 Score = 131 bits (144), Expect = 1e-24 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || ||||| ||||| |||||||| |||||||| ||||||| Sbjct 8052 ATGCTGTCATTACTGTCCCTGCGTATTTCAATGATTCACAACGCCAAGCTACCAAAGATG 7993 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || ||||| || || || |||||| | |||||||||||||| |||||||| | Sbjct 7992 CTGGTCAAATCGCTGGGCTAAACGTACTTCGTGTCATCAATGAACCTACAGCTGCTGCTC 7933 Query 550518 TTGCATATGG 550527 |||| ||||| Sbjct 7932 TTGCTTATGG 7923 >seq1718 Length=23864 Score = 129 bits (142), Expect = 5e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 550024 TTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083 ||| |||||||| | ||| |||| ||||| ||||| || || ||||| || || || | Sbjct 322 TTGCGTTGGTGTATTCCAACATGGAAAAGTGGAAATCATAGCTAATGACCAGGGCAATCG 263 Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 ||||| || |||||| ||||||| || || || | | | | |||||||| || || Sbjct 262 CACTACCCCCAGTTATGTCGCTTTCACCGACACCGAGCGTCTGATCGGTGATGCTGCCAA 203 Query 550144 ATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG 550203 | || | || ||||||||||| ||| |||| ||||| |||||| | ||||| | Sbjct 202 GAACCAGGTGGCTATGAATCCTACCAACACTGTTTTCGATGCCAAACGTCTCATTGGTCG 143 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCA 550254 | ||| ||||| | ||| |||| |||||||| |||||||| ||||| Sbjct 142 TCGATTTGATGATAGTATTGTGCAGGATGATATGAAACATTGGCCCTTCCA 92 >seq1635 Length=24574 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || |||||||| || ||| ||| || |||||||| |||| |||||| | | Sbjct 5571 AGACGAAGCACAAGATGGAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAGAGTACGT 5630 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || || || ||||| |||| ||| ||||| || || || || || Sbjct 5631 CCGTCTTCCAGCTGCTTACCAGCGAAAATGAGTCGTTGTTGATCTGGGGGGATGCCCTCC 5690 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || ||||| || || || |||||| || ||| | | | |||||||| Sbjct 5691 TTGTCCTGAATCTTCGCCTTCACATTCTCAATCGTGTCACTCGGCTCAACCTCGAGAGTT 5750 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | |||||||| || || || || || |||||||||||| Sbjct 5751 ATTGTTTTACCGGTGAGGGTCTTCACAAAAATTTGCATA 5789 Score = 102 bits (112), Expect = 7e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || |||||||| || || ||| || |||||||| |||| ||||| | Sbjct 15492 AGACGAAGCACAAGATGGAGAGTTGATTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGC 15433 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || ||||| || || ||||| |||| ||| ||||| || || || || || Sbjct 15432 CCCTCTTCCAGCTGTTTGCCAGCGAAAATGAGTCGTTGTTGATCTGGGGGGATGCCCTCC 15373 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || ||||| || || || |||||| || ||| | | | ||||||||| Sbjct 15372 TTGTCCTGAATCTTCGCCTTCACATTCTCAATCGTGTCACTCGGCTCAACCTCGAGAGTA 15313 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| || || || || |||||||||||| Sbjct 15312 ATTGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATA 15274 >seq1335 Length=27242 Score = 86.0 bits (94), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 393931 AATAACAAAATTAGCTCCTGGATATACACGACGT-CCATTTTTTACTAATTGTGTTAAAT 393989 || |||||| || ||||||||||| || | || ||||| || |||||| | || | Sbjct 18105 AACAACAAACTTGGCTCCTGGATA--CATG--GTACCATTATTCACTAATCTTTGTAGGT 18050 Query 393990 ATTCAATGTTATGTTTTGTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTG 394049 | ||||| || || || || |||| || || | |||| ||||| | | | Sbjct 18049 AATCAATATTCGCTTGAGTGACGCGTTCAGGGAACGTGAGATTCTGAGCAATTGATCGGG 17990 Query 394050 GTAGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACA 394109 | | ||| |||| || ||| |||| ||||||||| | ||||||||||| ||| | || | Sbjct 17989 GAACTCCAACTTGATCAAGGGCAAGATTTGGATCAGCAGTAATAACTGTCCGAGCAGAAA 17930 Query 394110 TATCCACACGTTTTCCCATAAGATTTCCACGAATTCTACCTTCTTTACCT 394159 || |||||||| ||||| | || || | ||| | ||| |||| ||| Sbjct 17929 AGTCAACACGTTTGCCCATCAAGTTGCCTCTAATACGACCAGCTTTGCCT 17880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028438636323880