Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq14526 84.2 4e-11 >seq14526 Length=1284 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/133 (73%), Gaps = 11/133 (8%) Strand=Plus/Plus Query 81653 TCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAAAG 81701 ||||| || || || || ||||| ||||| | | ||||| || |||| Sbjct 745 TCCTTTTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCCAATTGCTTGCCGGCAAAA 804 Query 81702 ATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATTT 81761 || ||||||||||| |||| | ||| | ||||||||||||||||| ||||||| ||| Sbjct 805 ATCAGTCTTTGTTGGTCTGGTGGGATTCCCTCCTTATCTTGAATCTTGGCTTTTACATTC 864 Query 81762 TCAATCGTATTAC 81774 |||||||||| || Sbjct 865 TCAATCGTATCAC 877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903228123720320