Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 109 7e-19 >seq2 Length=118199 Score = 109 bits (120), Expect = 7e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||||||| || | || || |||| ||||| ||||| || || Sbjct 63197 GTGCAGACCCTCGTCACGGCTAATCAACTCGTTACTGAAGGTGAGACCCGGCATTAGGCC 63256 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||||||||||||||| |||| ||||| || |||||||| | ||||||||| Sbjct 63257 ACGCTTCTTCAACCAGAAGATCGAGGCGAATGAACCCGAGAAGAAAACCCCCTCCACTGC 63316 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTG-TATCAAACCACTTCATCG 130205 || ||||| | | |||||| ||| | | || | ||||| | | | |||| ||| | Sbjct 63317 AGCAAACGCCATAACACGCTCCGCATACG-TCGCGTCTTTGTTCGCGATCCACCTCAGTG 63375 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 |||| | |||||| |||| | ||| || | |||| ||||| | ||||| Sbjct 63376 CCCAATCCGCCTTCTTCTTCACACATGGCAGAGTCTCAATCGCATTGAAGAG 63427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618309874106720