Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4909 107 2e-18 seq11958 100 3e-16 seq2674 95.1 1e-14 seq857 95.1 1e-14 seq46426 93.3 4e-14 >seq4909 Length=66758 Score = 107 bits (118), Expect = 2e-18 Identities = 554/876 (63%), Gaps = 32/876 (4%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| || || || || || ||||| || |||||||| || || |||||| Sbjct 51070 TGGTACTCGCCCACCCGCTTCTCAAAGAAGTTCGTCTTGCCCTCCAGGCTGATGTTCTCC 51129 Query 16736 ATGAAATCAAAAGGATT---AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||||| || || ||||| || || |||| || | | | | ||| || | || Sbjct 51130 ATGAAGTCGAAGGGATTCTCAG-AGTTGAAGGCCTTG--GGGCAGCTCAGCTCAGTGAGC 51186 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | || || || || || || || || ||||||| | |||||||||| || || || Sbjct 51187 AGCCTGTCAGCCACGAACTCGATGTAGCGGCACATGGAGGCGCAGTTCATGCCGATGAGG 51246 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||||| | ||| ||||||| || | ||||| || ||||| || || || Sbjct 51247 GACACCGGCAAAGCCTCCGTCAGGAAGCTCTGCTCGATGCGCACCGCGTCACGGATGAT- 51305 Query 16913 CTAGCAACTCGTTCCTCGGAC-----GGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967 | |||| | | | ||| || | | | ||| || |||||||| || | Sbjct 51306 ----CTCCTCGATGCGCTGACTGCTTGGCGGCCGCTGAAGGTGGCGGAACATCAGGCAGG 51361 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 | || || || | || ||||| | |||||| || ||||| || |||| || | Sbjct 51362 CAAAGTCAGTGTGGAGGCCTTCGTCGCGGCTGATGAGCTCGTTGCTGAAGGTCAGGCCTG 51421 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAAC--GACCCAGAAAAGAATAT 17085 |||| || || ||||| | ||| || | |||||||| | | | ||||| | || Sbjct 51422 GCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGCTGAAAA--AGAT 51479 Query 17086 ACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAAT 17145 ||||| |||| ||| || || | | || ||| || | || || |||| || Sbjct 51480 GCCCTCAACGGCTGCGAAGGCCACCACGCGCTCGCCGAAGGTGGCCCGCTTGTGGGAGAT 51539 Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATC----CATCGTTTCTATGGCCT 17201 ||| || || |||| || || || || | ||| || ||| || ||||| | Sbjct 51540 CCAGTTGAGCGCCCAGTCTGCCTTCTG----ACGCACCGGCGGCAGCGTCTCGATGGCGT 51595 Query 17202 TAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 | || | | || | | | | |||| | || | || || || || ||| Sbjct 51596 TGAACAGCAGGTCGCGCTGGGCCG--GGTCCCGCACGTAGCTGTCAATCAGCAGCGAGTA 51653 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 ||| || ||||| |||||||| || ||||| || ||||| ||||| | ||| |||| Sbjct 51654 CATCTCCGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCCGG 51713 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 || || || ||| | |||||| ||| | || || ||||||||||||||||| || Sbjct 51714 GATCTGCACCTCCTGGGCGAATCGCTCCACCAGGTTCTCGTTCACGATGCCGTCAGAGGC 51773 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCA 17439 ||||| || |||| | | | | || | | |||| ||| || ||| Sbjct 51774 AGCGAAGAAGGCCAGCACGTACGAGACAAAGTGCCTCTCGTTGTCTGTGAGCTGCTTCCA 51833 Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499 ||||| | || ||| | ||||| || || ||||| || || ||||| ||||| Sbjct 51834 GTCCTCCAGGTCCTTGCTGAGGTCCACCTCCTCCACTGTCCAGAAGCTGGCCACCGCCTT 51893 Query 17500 TTTATACATATTCCAAATATCATTGTATTGTATGGG 17535 || ||||| | ||| || || | ||| || ||||| Sbjct 51894 CTTGTACATCTGCCAGATGTCGTGGTACTGGATGGG 51929 >seq11958 Length=54492 Score = 100 bits (110), Expect = 3e-16 Identities = 547/870 (63%), Gaps = 20/870 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| || || || || || ||||| ||||||||||| || || |||||| Sbjct 33176 TGGTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTTTTGCCCTCCAGGCTGATGTTCTCC 33117 Query 16736 ATGAAATCAAAAGGATT---AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||||| || || ||||| || || |||| || | | | ||| || | || Sbjct 33116 ATGAAGTCGAAGGGATTCTCAG-AGTTGAAGGCCTTG--GGGCAGTTCAGCTCAGTGAGC 33060 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | || || || || || || || || ||||||| | |||||||||| || || || Sbjct 33059 AGCCTGTCAGCCACGAACTCGATGTAGCGGCACATGGAGGCGCAGTTCATGCCAATCAGG 33000 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||||| | ||| ||||||| || | ||||| || ||||| || || || Sbjct 32999 GACACCGGCAAAGCCTCCGTCAGGAAGCTCTGCTCGATGCGCACCGCGTCACGGATGAT- 32941 Query 16913 CTAGCAACTCGTTCCTCGGAC-----GGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967 | |||| | | | ||| || | | | ||| || |||||||| || | Sbjct 32940 ----CTCCTCGATGCGCTGACTGCTTGGCGGCCGCTGAAGGTGGCGGAACATCAGGCAGG 32885 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 | || || || | || ||||| | |||||| || ||||| || |||| || | Sbjct 32884 CAAAGTCAGTGTGGAGGCCTTCGTCGCGGCTGATGAGCTCGTTGCTGAAGGTCAGGCCTG 32825 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 |||| || || ||||| | ||| || | |||||||| || ||||| || | Sbjct 32824 GCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGCTGAAGAAGATGC 32765 Query 17088 CCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCC 17147 |||| || | ||| || || | | || ||| || | || || |||| |||| Sbjct 32764 CCTCAACAGCTGCGAAGGCCACCACGCGCTCGCCGAAGGTGGCCCGCTTGTGGGAGATCC 32705 Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 | || || |||| || || || || | || ||| || ||||| || || | Sbjct 32704 AGTTGAGCGCCCAGTCTGCCTTCTGGCGCACCGGCGGCAGCGTCTCGATGGCGTTGAACA 32645 Query 17208 --ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 | || | | | | |||| | || | || || || || |||||| || Sbjct 32644 GCAGGTCGCGCTGGGCCG--GGTCCCGCACGTAGCTGTCAATCAGCAGCGAGTACATCTC 32587 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 ||||| |||||||| || ||||| || ||||| ||||| | ||| |||| || || Sbjct 32586 CGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCCGGGATCTG 32527 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 || ||| | ||| || ||| | || || ||||||||||||||||| || ||||| Sbjct 32526 CACCTCCTGGGCGAACCGCTCCACCAGGTTCTCGTTCACGATGCCGTCAGAGGCAGCGAA 32467 Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTT 17445 || |||| | | | | || | | |||| ||| || |||||||| Sbjct 32466 GAAGGCCAGCACGTACGAGACAAAGTGCCTCTCGTTGTCTGTGAGCTGCTTCCAGTCCTC 32407 Query 17446 TAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATA 17505 | || ||| | ||||| || || ||||| || || ||||| ||||| || || Sbjct 32406 CAGGTCCTTGCTGAGGTCCACCTCCTCCACTGTCCAGAAGCTGGCCACCGCCTTCTTGTA 32347 Query 17506 CATATTCCAAATATCATTGTATTGTATGGG 17535 ||| | ||| || || | ||| || ||||| Sbjct 32346 CATCTGCCAGATGTCGTGGTACTGGATGGG 32317 >seq2674 Length=67143 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAAGTAGATACAG 119920 || ||||| || || ||||| ||||| || | ||| || || || ||||||||| | Sbjct 63895 CCAACGTAGCCATTAGGATCTCGGCCATCCAAATTGTACTTGTCATTCAAGTAGATAGAA 63836 Query 119921 ACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACATA 119980 | | ||| | || | ||| |||| ||||| || || || ||||||||||| Sbjct 63835 ATAGACAGCGCCTCGGCGGGCGACTCCGTCCACTCCAGAATCTTCTTGGCCCAGTACATG 63776 Query 119981 CGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAG 120040 || ||||| || |||||||| | || |||||||| || || || ||||||||||| | Sbjct 63775 CGCAAGTAGCCGTGCATTTTGGCCTCGCGAACCATCTGCAGCTGGGCGGCGTTCCACAGC 63716 Query 120041 GGATCGTGTGTACGG 120055 | ||||| || ||| Sbjct 63715 CGGTCGTGAGTCCGG 63701 >seq857 Length=202914 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAAGTAGATACAG 119920 || ||||| || || ||||| ||||| || | ||| || || || ||||||||| | Sbjct 74257 CCAACGTAGCCATTAGGATCTCGGCCATCCAAATTGTACTTGTCATTCAAGTAGATAGAA 74316 Query 119921 ACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACATA 119980 | | ||| | || | ||| |||| ||||| || || || ||||||||||| Sbjct 74317 ATAGACAGCGCCTCGGCGGGCGACTCCGTCCACTCCAGAATCTTCTTGGCCCAGTACATG 74376 Query 119981 CGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAG 120040 || ||||| || |||||||| | || |||||||| || || || ||||||||||| | Sbjct 74377 CGCAAGTAGCCGTGCATTTTGGCCTCGCGAACCATCTGCAGCTGGGCGGCGTTCCACAGC 74436 Query 120041 GGATCGTGTGTACGG 120055 | ||||| || ||| Sbjct 74437 CGGTCGTGAGTCCGG 74451 >seq46426 Length=159343 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAAGTAGATACAG 119920 || ||||| || |||||||| ||||| || | ||| || || || ||||||||| | Sbjct 28011 CCAACGTAGCCATTGGGATCTCGGCCATCCAAATTGTACTTGTCATTCAAGTAGATAGAA 28070 Query 119921 ACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACATA 119980 | | ||| | || | ||| |||| ||||| || || || ||||||||||| Sbjct 28071 ATAGACAGCGCCTCGGCGGGCGACTCCGTCCACTCCAGAATCTTCTTGGCCCAGTACATG 28130 Query 119981 CGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAG 120040 || ||||| || |||||||| | || |||||||| || || || || |||||||| | Sbjct 28131 CGCAAGTAGCCGTGCATTTTGGCCTCGCGAACCATCTGCAGCTGGGCAGCGTTCCACAGC 28190 Query 120041 GGATCGTGTGTACG 120054 | ||||| || || Sbjct 28191 CGGTCGTGAGTCCG 28204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517227477658320