Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2059 86.0 1e-11 seq1675 86.0 1e-11 >seq2059 Length=104123 Score = 86.0 bits (94), Expect = 1e-11 Identities = 181/269 (67%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || ||||| ||| ||||||| ||||||||||| || || ||| ||||| Sbjct 73650 TGAATGTTGAGGCCGACTCCGCCAGCAGACTTGGAGATGAGGGCGCACTGCTTCAGAGTG 73709 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || || ||||||||||| || || | | | || |||||||| ||| || || Sbjct 73710 TCGTAGATGCCCTCAATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGGAGCTCAGCTGC 73769 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATA---GTGCCTC 94950 || | ||| || ||||||||| || || || ||||| || | ||| | Sbjct 73770 GGCTTCGGTGTGCCGGCATTAAACAGAGTAGGACTGGCGTGGGTGAACCACCTGTG---C 73826 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 |||||||| || || | || ||| | | | | || | ||| |||||| ||| Sbjct 73827 GACATGAGCTCGTAGGACTCGATGGCCGCCTCCACGTTGCCGCAGTGGATGCCGCAGGCC 73886 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTC 95039 || ||||| | || || ||| || ||||| Sbjct 73887 ACGCGCATCAGCAGGTGCTGCGGCCGCTC 73915 >seq1675 Length=86464 Score = 86.0 bits (94), Expect = 1e-11 Identities = 181/269 (67%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || ||||| ||| ||||||| ||||||||||| || || ||| ||||| Sbjct 16466 TGAATGTTGAGGCCGACTCCGCCAGCAGACTTGGAGATGAGGGCGCACTGCTTCAGAGTG 16525 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || || ||||||||||| || || | | | || |||||||| ||| || || Sbjct 16526 TCGTAGATGCCCTCAATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGGAGCTCAGCTGC 16585 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATA---GTGCCTC 94950 || | ||| || ||||||||| || || || ||||| || | ||| | Sbjct 16586 GGCTTCGGTGTGCCGGCATTAAACAGAGTAGGACTGGCGTGGGTGAACCACCTGTG---C 16642 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 |||||||| || || | || ||| | | | | || | ||| |||||| ||| Sbjct 16643 GACATGAGCTCGTAGGACTCGATGGCCGCCTCCACGTTGCCGCAGTGGATGCCGCAGGCC 16702 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTC 95039 || ||||| | || || ||| || ||||| Sbjct 16703 ACGCGCATCAGCAGGTGCTGCGGCCGCTC 16731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988960520641170