Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq49094 125 7e-24 seq47908 125 7e-24 seq4339 125 7e-24 seq45287 98.7 1e-15 seq1807 95.1 1e-14 seq767 95.1 1e-14 seq45308 91.5 1e-13 seq48 91.5 1e-13 seq2636 89.7 5e-13 >seq49094 Length=36862 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 21540 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 21481 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 21480 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 21422 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 21421 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 21362 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 21361 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 21314 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 22224 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 22165 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 22164 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 22106 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 22105 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 22046 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 22045 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 21998 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| ||||| ||| Sbjct 21996 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTC 21937 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | || || ||||| || ||||| |||| ||||| ||||| || || || Sbjct 21936 AGAGTGCGTCCA-TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGG 21878 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 21877 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 21818 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 21817 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 21770 >seq47908 Length=47913 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 8478 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 8419 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 8418 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 8360 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 8359 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 8300 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 8299 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 8252 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 9162 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 9103 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 9102 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 9044 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 9043 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 8984 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 8983 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 8936 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| ||||| ||| Sbjct 8934 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTC 8875 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | || || ||||| || ||||| |||| ||||| ||||| || || || Sbjct 8874 AGAGTGCGTCCA-TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGG 8816 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 8815 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 8756 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 8755 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 8708 >seq4339 Length=44113 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 37061 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 37120 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 37121 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 37179 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 37180 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 37239 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 37240 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 37287 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| || |||||| Sbjct 37745 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 37804 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | ||||| ||||| || ||||| |||| ||||| |||||||| || || Sbjct 37805 AGAGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGG 37863 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 37864 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 37923 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 37924 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 37971 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||| | ||||| || ||| || || ||||| ||||| ||| Sbjct 37289 CCTCCACGCAGACGCAGAACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTC 37348 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || | || || ||||| || ||||| |||| ||||| ||||| || || || Sbjct 37349 AGAGTGCGTCCA-TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGG 37407 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| ||||||| || Sbjct 37408 GATGCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGCTGGGCTCAAC 37467 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 37468 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 37515 >seq45287 Length=50511 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || || || ||||||| || ||||||||||| || ||||| || ||| Sbjct 2293 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGTGGGATGCCCTCCTTG 2352 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||||||| ||| | | || | |||||| | ||||| ||||||| || | Sbjct 2353 TCCTGGATTTTTGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTGATG 2412 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG 139766 |||||||| || | || || || ||||||||||||| Sbjct 2413 GTCTTGCCTGTTAGGGTCTTGACAAATATTTGCATAG 2449 >seq1807 Length=57471 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/144 (75%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 58287 GCCTCAATGTTGCCCAAATCGCCGACGTGTCGCACCGCAGCGTTAGGCGCGCCATGATTG 58346 ||||||| |||||||| ||| |||||||| | | || | ||| || ||||| || | Sbjct 43934 GCCTCAACGTTGCCCAGATCCCCGACGTGCCTCTCCTCGTCGTCCGGAGCGCCGTGGGTC 43993 Query 58347 C---TACCCGTAGGATTGAAATGTTCGCCGGCCGAAGTGCATCCGTTACTCATATCGCCA 58403 | | | || |||||||||| |||| ||||| ||| ||||| | | |||||| Sbjct 43994 CGTTTGCACG---GATTGAAATGAGCGCCAGCCGACACGCAGCCGTTCGTATTGTCGCCA 44050 Query 58404 AATTCGTGCACGTGAAAGCCGTGC 58427 |||||||||||||||||||||||| Sbjct 44051 AATTCGTGCACGTGAAAGCCGTGC 44074 >seq767 Length=230551 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/144 (75%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 58287 GCCTCAATGTTGCCCAAATCGCCGACGTGTCGCACCGCAGCGTTAGGCGCGCCATGATTG 58346 ||||||| |||||||| ||| |||||||| | | || | ||| || ||||| || | Sbjct 117428 GCCTCAACGTTGCCCAGATCCCCGACGTGCCTCTCCTCGTCGTCCGGAGCGCCGTGGGTC 117487 Query 58347 C---TACCCGTAGGATTGAAATGTTCGCCGGCCGAAGTGCATCCGTTACTCATATCGCCA 58403 | | | || |||||||||| |||| ||||| ||| ||||| | | |||||| Sbjct 117488 CGTTTGCACG---GATTGAAATGAGCGCCAGCCGACACGCAGCCGTTCGTATTGTCGCCA 117544 Query 58404 AATTCGTGCACGTGAAAGCCGTGC 58427 |||||||||||||||||||||||| Sbjct 117545 AATTCGTGCACGTGAAAGCCGTGC 117568 >seq45308 Length=123861 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||| || | ||| | || ||||| || || || ||||| || Sbjct 119554 GCCACCGCGCAGCCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGA 119495 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || ||| || ||||| || || || |||||| || ||||| ||||| || Sbjct 119494 TAGAGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGG 119435 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| |||||| ||| | | || | |||||| | ||||| || Sbjct 119434 GATGCCCTCCTTGTCCTGGATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAAC 119375 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG 139766 ||||| || | |||||||| || | || || || ||||||||||||| Sbjct 119374 CTCAAGTGTGATGGTCTTGCCCGTTAGGGTCTTGACAAATATTTGCATAG 119325 >seq48 Length=38877 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||| || | ||| | || ||||| || || || ||||| || Sbjct 33798 GCCACCGCGCAGCCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGA 33739 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || ||| || ||||| || || || |||||| || ||||| ||||| || Sbjct 33738 TAGAGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGG 33679 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| |||||| ||| | | || | |||||| | ||||| || Sbjct 33678 GATGCCCTCCTTGTCCTGGATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAAC 33619 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG 139766 ||||| || | |||||||| || | || || || ||||||||||||| Sbjct 33618 CTCAAGTGTGATGGTCTTGCCCGTTAGGGTCTTGACAAATATTTGCATAG 33569 >seq2636 Length=142077 Score = 89.7 bits (98), Expect = 5e-13 Identities = 107/144 (74%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 58287 GCCTCAATGTTGCCCAAATCGCCGACGTGTCGCACCGCAGCGTTAGGCGCGCCATGATTG 58346 ||||| | |||||||| ||| |||||||| | | || | ||| || ||||| || | Sbjct 25622 GCCTCGACGTTGCCCAGATCCCCGACGTGCCTCTCCTCGTCGTCCGGAGCGCCGTGGGTC 25681 Query 58347 C---TACCCGTAGGATTGAAATGTTCGCCGGCCGAAGTGCATCCGTTACTCATATCGCCA 58403 | | | || |||||||||| |||| ||||| ||| ||||| | | |||||| Sbjct 25682 CGTTTGCACG---GATTGAAATGAGCGCCAGCCGACACGCAGCCGTTCGTATTGTCGCCA 25738 Query 58404 AATTCGTGCACGTGAAAGCCGTGC 58427 |||||||||||||||||||||||| Sbjct 25739 AATTCGTGCACGTGAAAGCCGTGC 25762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495759081860800