Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq45287 156 1e-32 seq45308 145 2e-29 seq10232 145 2e-29 seq5620 145 2e-29 seq2451 145 2e-29 seq48 145 2e-29 seq7193 131 4e-25 seq16775 122 2e-22 seq9062 122 2e-22 seq3090 118 2e-21 seq4616 116 9e-21 seq46594 113 1e-19 seq1520 113 1e-19 >seq45287 Length=50511 Score = 156 bits (172), Expect = 1e-32 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || || || || || ||||| ||||| |||||||||||||| || Sbjct 2230 AGCCGCAGGACCAGGTGCAAGGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTCCTG 2289 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || || || || || || | ||| ||||| || || || || || Sbjct 2290 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGTGGGATGCCCTCC 2349 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| || |||||||| ||||| || | ||| |||||||| || ||||| ||||| Sbjct 2350 TTGTCCTGGATTTTTGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTG 2409 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGT 104571 || ||||| || || || || || |||||||| |||| | ||| ||||| Sbjct 2410 ATGGTCTTGCCTGTTAGGGTCTTGACAAATATTTGCA--TAGTGGACAGT 2457 >seq45308 Length=123861 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| |||||||||||||||||||| || Sbjct 119544 AGCCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGATAGAGTCCTG 119485 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || || || || || || | | ||| || || || || || || || Sbjct 119484 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCC 119425 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| || || ||||| ||||| || | ||| |||||||| || ||||| ||||| Sbjct 119424 TTGTCCTGGATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTG 119365 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| ||||| Sbjct 119364 ATGGTCTTGCCCGTTAGGGTCTTGACAAATATTTGCAT 119327 >seq10232 Length=31523 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| ||||| |||||||||||||| || Sbjct 29847 AGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTCCTG 29788 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || ||||| |||||||| || || | ||| || || || || || || || Sbjct 29787 CCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 29728 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| || || ||||| || | || |||||||| || ||||| || || Sbjct 29727 TTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCGCTAGGCTCAACCTCAAGGGTG 29668 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || || || || ||||| Sbjct 29667 ATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTGCAT 29630 >seq5620 Length=52182 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| ||||| |||||||||||||| || Sbjct 11587 AGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTCCTG 11528 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || ||||| |||||||| || || | ||| || || || || || || || Sbjct 11527 CCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 11468 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| || || ||||| || | || |||||||| || ||||| || || Sbjct 11467 TTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCGCTAGGCTCAACCTCAAGGGTG 11408 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || || || || ||||| Sbjct 11407 ATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTGCAT 11370 >seq2451 Length=180161 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| ||||| |||||||||||||| || Sbjct 141596 AGCCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTCCTG 141655 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || ||||| |||||||| || || | ||| || || || || || || || Sbjct 141656 CCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 141715 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| || || ||||| || | || |||||||| || ||||| || || Sbjct 141716 TTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCGCTAGGCTCAACCTCAAGGGTG 141775 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || || || || ||||| Sbjct 141776 ATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTGCAT 141813 >seq48 Length=38877 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| || || || || | || || || ||||| |||||||||||||||||||| || Sbjct 33788 AGCCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGATAGAGTCCTG 33729 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || || || || || || | | ||| || || || || || || || Sbjct 33728 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCC 33669 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| || || ||||| ||||| || | ||| |||||||| || ||||| ||||| Sbjct 33668 TTGTCCTGGATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTG 33609 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| ||||| Sbjct 33608 ATGGTCTTGCCCGTTAGGGTCTTGACAAATATTTGCAT 33571 >seq7193 Length=55923 Score = 131 bits (144), Expect = 4e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || || || ||||| || || ||||| Sbjct 18700 ATTCCACCTCGAAGACGCAGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCG 18759 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||| ||||| || || || || || || || || | | ||| ||||| ||| Sbjct 18760 GACAGAGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGA 18819 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||| || || || || || | || || ||| || Sbjct 18820 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAAGGCTCG 18879 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 |||||||| || || ||||| || || || || || ||||| ||||||||||||| Sbjct 18880 ACCTCTAGCGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATTTTGT 18934 >seq16775 Length=22248 Score = 122 bits (134), Expect = 2e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || || || ||||| || || ||||| Sbjct 11933 ATTCCACCTCGAAGACGCAGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCG 11874 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||| ||||| || || || || || || || || | | ||| ||||| ||| Sbjct 11873 GACAGAGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGA 11814 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||| || || || || || | || || ||| || Sbjct 11813 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAAGGCTCG 11754 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 ||||| || || || ||||| || || || || || || || ||||||||||||| Sbjct 11753 ACCTCCAGCGTTATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATTTTGT 11699 >seq9062 Length=51073 Score = 122 bits (134), Expect = 2e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || || || ||||| || || ||||| Sbjct 32340 ATTCCACCTCGAAGACGCAGCACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCG 32281 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||| ||||| || || || || || || || || | | ||| ||||| ||| Sbjct 32280 GACAGAGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGA 32221 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||| || || || || || | || || ||| || Sbjct 32220 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCCGAAGGCTCG 32161 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 ||||| || || || ||||| || || || || || || || ||||||||||||| Sbjct 32160 ACCTCCAGCGTTATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATTTTGT 32106 >seq3090 Length=107577 Score = 118 bits (130), Expect = 2e-21 Identities = 200/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 78424 CTATAGTTATATATGTCAGCCTATAGATTATTCAGATAACGTGTACGAAGTGAGAATTAC 78483 ||| |||||| | |||||||| | || ||||| || || ||||| | ||||| | Sbjct 9012 CTACAGTTATCTCTGTCAGCCAGTTGACTATTCTGACAATCCTTACGAGTTAAGAATCGC 8953 Query 78484 TAGAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTT 78543 | ||| | |||||||| ||| |||| || | || || | | || ||||| ||||| Sbjct 8952 CAAAGCGCTCTGGTGGTACTATTTCTCAAAGTGCATCGAGTTTATGGACACTATATTCTT 8893 Query 78544 CATCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTAT 78603 || | || ||||| |||||||||||||||||| || || || ||||| ||||| Sbjct 8892 TGTCTTGCGCAAGAAGAATAATCAAATTAGTTTTCTGCACGTTTACCATCACGCCACTAT 8833 Query 78604 GTT--TACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAGCGTTTCTAGGA 78661 ||| | ||||| ||||| || | |||||| | |||| || || ||||| | || Sbjct 8832 GTTCCCAATTTGG--TGGATTGGAGTGAAATGGGTACCAGGTGGTCAGTCGTTTTTTGGC 8775 Query 78662 GCTGAAATAAATTCATTCGTACACGTTATTATGTATACTTATTACGGT 78709 ||| || || || || | ||||| || ||||||| || || ||| Sbjct 8774 GCTATGATGAACTCTTTTATCCACGTCATCATGTATAGCTACTATGGT 8727 >seq4616 Length=10833 Score = 116 bits (128), Expect = 9e-21 Identities = 200/289 (69%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 78424 CTATAGTTATATATGTCAGCCTATAGATTATTCAGATAACGTGTACGAAGTGAGAATTAC 78483 ||| |||||| | || ||||| | || ||||| || || ||||| | ||||| | Sbjct 4652 CTACAGTTATCTCTGCCAGCCAGTTGACTATTCTGACAATCCTTACGAGTTAAGAATCGC 4593 Query 78484 TAGAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTT 78543 | |||| | |||||||| ||| ||||||| | || || | | || ||||| ||||| Sbjct 4592 CAAAGCACTCTGGTGGTACTATTTCTCTAAGTGCATCGAGTTTATGGACACTATATTCTT 4533 Query 78544 CATCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTAT 78603 || | || ||||| |||||||||||||||||| || || || ||||| || || Sbjct 4532 TGTCTTGCGCAAGAAGAATAATCAAATTAGTTTTCTGCACGTTTACCATCACGCCACCAT 4473 Query 78604 GTTT---ACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAGCGTTTCTAGG 78660 |||| | ||||| ||||| || | |||||| | |||| || || ||||| | || Sbjct 4472 GTTTCCCAATTTGG--TGGATTGGAGTGAAATGGGTACCAGGTGGTCAGTCGTTTTTTGG 4415 Query 78661 AGCTGAAATAAATTCATTCGTACACGTTATTATGTATACTTATTACGGT 78709 ||| || || || || | ||||| || ||||| | || || ||| Sbjct 4414 CGCTATGATGAACTCTTTTATCCACGTCATCATGTACAGCTACTATGGT 4366 >seq46594 Length=67017 Score = 113 bits (124), Expect = 1e-19 Identities = 199/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 78424 CTATAGTTATATATGTCAGCCTATAGATTATTCAGATAACGTGTACGAAGTGAGAATTAC 78483 ||| |||||| | || ||||| | || ||||| || || ||||| | ||||| | Sbjct 17213 CTACAGTTATCTCTGCCAGCCAGTTGACTATTCTGACAATCCTTACGAGTTAAGAATCGC 17154 Query 78484 TAGAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTT 78543 | |||| | |||||||| ||| ||||||| | || || | | || ||||| ||||| Sbjct 17153 CAAAGCACTCTGGTGGTACTATTTCTCTAAGTGCATCGAGTTTATGGACACTATATTCTT 17094 Query 78544 CATCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTAT 78603 || | || ||||| |||||||||||||||||| || || || ||||| || || Sbjct 17093 TGTCTTGCGCAAGAAGAATAATCAAATTAGTTTTCTGCACGTTTACCATCACGCCACCAT 17034 Query 78604 GTT--TACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAGCGTTTCTAGGA 78661 ||| | ||||| ||||| || | |||||| | |||| || || ||||| | || Sbjct 17033 GTTCCCAATTTGG--TGGATTGGAGTGAAATGGGTACCAGGTGGTCAGTCGTTTTTTGGC 16976 Query 78662 GCTGAAATAAATTCATTCGTACACGTTATTATGTATACTTATTACGGT 78709 ||| || || || || | ||||| || ||||| | || || ||| Sbjct 16975 GCTATGATGAACTCTTTTATCCACGTCATCATGTACAGCTACTATGGT 16928 >seq1520 Length=56574 Score = 113 bits (124), Expect = 1e-19 Identities = 199/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Plus Query 78424 CTATAGTTATATATGTCAGCCTATAGATTATTCAGATAACGTGTACGAAGTGAGAATTAC 78483 ||| |||||| | || ||||| | || ||||| || || ||||| | ||||| | Sbjct 45861 CTACAGTTATCTCTGCCAGCCAGTTGACTATTCTGACAATCCTTACGAGTTAAGAATCGC 45920 Query 78484 TAGAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTT 78543 | |||| | |||||||| ||| ||||||| | || || | | || ||||| ||||| Sbjct 45921 CAAAGCACTCTGGTGGTACTATTTCTCTAAGTGCATCGAGTTTATGGACACTATATTCTT 45980 Query 78544 CATCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTAT 78603 || | || ||||| |||||||||||||||||| || || || ||||| || || Sbjct 45981 TGTCTTGCGCAAGAAGAATAATCAAATTAGTTTTCTGCACGTTTACCATCACGCCACCAT 46040 Query 78604 GTT--TACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAGCGTTTCTAGGA 78661 ||| | ||||| ||||| || | |||||| | |||| || || ||||| | || Sbjct 46041 GTTCCCAATTTGG--TGGATTGGAGTGAAATGGGTACCAGGTGGTCAGTCGTTTTTTGGC 46098 Query 78662 GCTGAAATAAATTCATTCGTACACGTTATTATGTATACTTATTACGGT 78709 ||| || || || || | ||||| || ||||| | || || ||| Sbjct 46099 GCTATGATGAACTCTTTTATCCACGTCATCATGTACAGCTACTATGGT 46146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150672970793192