Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq14855 91.5 8e-14 seq8229 91.5 8e-14 seq28698 89.7 3e-13 seq20298 89.7 3e-13 seq5649 89.7 3e-13 seq1708 89.7 3e-13 seq45624 87.8 9e-13 seq18767 87.8 9e-13 seq13466 87.8 9e-13 seq11829 87.8 9e-13 seq9743 87.8 9e-13 seq8611 87.8 9e-13 seq6848 87.8 9e-13 seq18711 86.0 3e-12 seq12009 84.2 1e-11 seq11678 84.2 1e-11 seq7747 84.2 1e-11 seq4926 84.2 1e-11 seq2723 84.2 1e-11 seq1258 84.2 1e-11 seq1072 84.2 1e-11 >seq14855 Length=22818 Score = 91.5 bits (100), Expect = 8e-14 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||||| ||||| || || ||||||| |||||||||||||||| |||||||| Sbjct 9294 AAAAAATCAG--TGGCCGGGGAGGGGCTCGAACCCTCGACCTTCGCGTTATCAGCACGAC 9237 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||| | |||| Sbjct 9236 GCTCTAACCAACTGAGCTACTCGGCC 9211 >seq8229 Length=51058 Score = 91.5 bits (100), Expect = 8e-14 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||||| ||||| || || ||||||| |||||||||||||||| |||||||| Sbjct 29218 AAAAAATCAG--TGGCCGGGGAGGGGCTCGAACCCTCGACCTTCGCGTTATCAGCACGAC 29161 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||| | |||| Sbjct 29160 GCTCTAACCAACTGAGCTACTCGGCC 29135 >seq28698 Length=5097 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 3116 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 3057 Query 11528 CCG 11530 ||| Sbjct 3056 CCG 3054 >seq20298 Length=10588 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 5481 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 5422 Query 11528 CCG 11530 ||| Sbjct 5421 CCG 5419 >seq5649 Length=89791 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 88002 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 87943 Query 11528 CCG 11530 ||| Sbjct 87942 CCG 87940 >seq1708 Length=55002 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 4823 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 4882 Query 11528 CCG 11530 ||| Sbjct 4883 CCG 4885 >seq45624 Length=118198 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 102281 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 102222 Query 11528 CC 11529 || Sbjct 102221 CC 102220 >seq18767 Length=18013 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 12550 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 12491 Query 11528 CC 11529 || Sbjct 12490 CC 12489 >seq13466 Length=38654 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 25433 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 25374 Query 11528 CC 11529 || Sbjct 25373 CC 25372 >seq11829 Length=44716 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 17757 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 17816 Query 11528 CC 11529 || Sbjct 17817 CC 17818 >seq9743 Length=41659 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 29503 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 29444 Query 11528 CC 11529 || Sbjct 29443 CC 29442 >seq8611 Length=84258 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 82081 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 82140 Query 11528 CC 11529 || Sbjct 82141 CC 82142 >seq6848 Length=68650 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 62101 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 62160 Query 11528 CC 11529 || Sbjct 62161 CC 62162 >seq18711 Length=10599 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||| ||||||||| || ||| | || || ||||||| |||||||||||||||| Sbjct 4131 AGAAAAAATAAAAAA--AATCTGGTCGGGGAGGGGCTCGAACCCTCGACCTTCGCGTTAT 4074 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTA 11522 ||||||||||||| ||||||||||||| Sbjct 4073 CAGCACGACGCTCTAACCAACTGAGCTA 4046 >seq12009 Length=23489 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 900 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTA 954 >seq11678 Length=5070 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 3148 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTA 3094 >seq7747 Length=63557 Score = 84.2 bits (92), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||| | || || ||||||| |||||||||||||||| ||||| Sbjct 33272 AATAAAAAA--AATCTGGTCGGGGAGGGGCTCGAACCCTCGACCTTCGCGTTATCAGCAC 33329 Query 11501 GACGCTCTRACCAACTGAGCTA 11522 |||||||| ||||||||||||| Sbjct 33330 GACGCTCTAACCAACTGAGCTA 33351 >seq4926 Length=58731 Score = 84.2 bits (92), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||| | || || ||||||| |||||||||||||||| ||||| Sbjct 45790 AATAAAAAA--AATCTGGTCGGGGAGGGGCTCGAACCCTCGACCTTCGCGTTATCAGCAC 45733 Query 11501 GACGCTCTRACCAACTGAGCTA 11522 |||||||| ||||||||||||| Sbjct 45732 GACGCTCTAACCAACTGAGCTA 45711 >seq2723 Length=119220 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 17091 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTA 17145 >seq1258 Length=154079 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| |||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 113424 GGCTCGAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTA 113370 >seq1072 Length=202928 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || || |||| |||||||||||||||| ||||||||||||| ||||||||||||| | || Sbjct 149833 GGCTCAAACCCTCGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTACTCGG 149774 Query 11528 CCG 11530 ||| Sbjct 149773 CCG 149771 Lambda K H 0.639 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261334486199224