Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq47094 86.0 6e-12 seq47093 86.0 6e-12 seq46222 86.0 6e-12 seq46221 86.0 6e-12 seq877 86.0 6e-12 seq838 86.0 6e-12 seq491 86.0 6e-12 >seq47094 Length=14157 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Minus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 5174 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 5118 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 5117 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 5058 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 5057 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 5025 >seq47093 Length=27843 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Minus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 17021 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 16965 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 16964 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 16905 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 16904 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 16872 >seq46222 Length=47452 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 8986 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 9042 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 9043 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 9102 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 9103 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 9135 >seq46221 Length=28410 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 4240 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 4296 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 4297 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 4356 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 4357 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 4389 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 19743 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 19799 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 19800 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 19859 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 19860 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 19892 >seq877 Length=26484 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 25864 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 25920 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 25921 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 25980 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 25981 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 26013 >seq838 Length=18488 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 8575 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 8631 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 8632 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 8691 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 8692 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 8724 >seq491 Length=294279 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/156 (74%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 94307 ATGTTGGCCAGGCTCGGGGGGATCGGCACCC-CG--CGCCGGACGCTGAAGGCCAGCCCG 94363 |||||| |||||| || || |||||| || || ||||| |||| |||||| Sbjct 91627 ATGTTGAGCAGGCTGGGAGG---CGGCACGGTCGGCCGGCGGACCGAGAAGCAGAGCCCG 91683 Query 94364 TGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT-C 94422 ||||||||| || ||||| || ||||||||||| | |||||||||||| || |||| | Sbjct 91684 TGGGCCTGGTTAGGGCCGTGATAGGGGTCCTGGCCCAGGATGACCACCTTCACCTCCTGC 91743 Query 94423 GGGCGCCGTGAGGCGC--GTCCAGGCGAACACGTCC 94456 |||| | |||||| ||||||| ||| || ||| Sbjct 91744 AGGCGGC---AGGCGCGAGTCCAGGAGAAGACCTCC 91776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458665096629840